RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 RBAKQ9NYW8 714 aaPredicted RBP18.27■□□□□ 0.51
SPIDR-227ENST00000541342 ASAP2O43150 1006 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 RIPK2O43353 540 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 FAM189A1O60320 539 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 SLCO1A2P46721 670 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 EFNA5P52803 228 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 SNCBQ16143 134 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 EFCAB12Q6NXP0 572 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 CCDC197Q8NCU1 140 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 SHC3Q92529 594 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 EMID1Q96A84 441 aaPredicted RBP18.26■□□□□ 0.51
SPIDR-227ENST00000541342 CPA4Q9UI42 421 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 RASAL2Q9UJF2 1139 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 SLC12A4Q9UP95 1085 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 RGS16O15492 202 aaPredicted RBP18.26■□□□□ 0.51
SPIDR-227ENST00000541342 ECM2O94769 699 aaPredicted RBP18.26■□□□□ 0.51
SPIDR-227ENST00000541342 C22orf31O95567 290 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 ZNF286BP0CG31 522 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 CYP1B1Q16678 543 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 TDRD10Q5VZ19 366 aaKnown RBP18.26■□□□□ 0.51
SPIDR-227ENST00000541342 ZPBP2Q6X784 338 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 VTI1AQ96AJ9 217 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 BTBD6Q96KE9 485 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 TMEM109Q9BVC6 243 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 CCDC134Q9H6E4 229 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 NOCTQ9UK39 431 aaKnown RBP18.26■□□□□ 0.51
SPIDR-227ENST00000541342 CNTNAP2Q9UHC6 1331 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 MGRN1O60291 552 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 SGPL1O95470 568 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 C4BPAP04003 597 aaKnown RBP18.26■□□□□ 0.51
SPIDR-227ENST00000541342 HARSP12081 509 aaKnown RBP18.26■□□□□ 0.51
SPIDR-227ENST00000541342 CDR1P51861 262 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 EXOC8Q8IYI6 725 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 NT5C1BQ96P26 610 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 MCM8Q9UJA3 840 aa18.26■□□□□ 0.51
SPIDR-227ENST00000541342 ZNF236Q9UL36 1845 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 IGF2BP3O00425 579 aaKnown RBP eCLIP18.25■□□□□ 0.51
SPIDR-227ENST00000541342 ADCY6O43306 1168 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 AGTP01019 485 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 INSRRP14616 1297 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 TNNI1P19237 187 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 MFAP3P55082 362 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 IGBP1P78318 339 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 GPC5P78333 572 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 PDE4CQ08493 712 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 AUHQ13825 339 aaKnown RBP18.25■□□□□ 0.51
SPIDR-227ENST00000541342 MESDQ14696 234 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 ZACNQ401N2 412 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 UBL4BQ8N7F7 174 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 ART4Q93070 314 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 FNBP1Q96RU3 617 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 ACO2Q99798 780 aaKnown RBP18.25■□□□□ 0.51
SPIDR-227ENST00000541342 ZSWIM8A7E2V4 1837 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 ABLIM1O14639 778 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 CYP26A1O43174 497 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 SMPD1P17405 629 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 TNFSF9P41273 254 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 CLUL1Q15846 466 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 ZBTB33Q86T24 672 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 NOP9Q86U38 636 aaKnown RBP18.25■□□□□ 0.51
SPIDR-227ENST00000541342 SLC47A2Q86VL8 602 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 EPS8L1Q8TE68 723 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 DHX38Q92620 1227 aaKnown RBP18.25■□□□□ 0.51
SPIDR-227ENST00000541342 RPS6KC1Q96S38 1066 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 TINF2Q9BSI4 451 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 C16orf70Q9BSU1 422 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 MRPL4Q9BYD3 311 aaKnown RBP18.25■□□□□ 0.51
SPIDR-227ENST00000541342 PTPN22Q9Y2R2 807 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 CLDN3O15551 220 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 VNN1O95497 513 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 LDHAP00338 332 aaKnown RBP18.25■□□□□ 0.51
SPIDR-227ENST00000541342 PRKCBP05771 671 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 MAPK4P31152 587 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 KCNJ1P48048 391 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 CCDC38Q502W7 563 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 RASAL3Q86YV0 1011 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 NLRP4Q96MN2 994 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 CXorf56Q9H5V9 222 aa18.25■□□□□ 0.51
SPIDR-227ENST00000541342 PODXLO00592 558 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 MTA2O94776 668 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 RARAP10276 462 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 HSPA6P17066 643 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 ADCY2Q08462 1091 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 C6orf118Q5T5N4 469 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 SCARA3Q6AZY7 606 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 MINDY3Q9H8M7 445 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 AAASQ9NRG9 546 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 INTS9Q9NV88 658 aaKnown RBP18.24■□□□□ 0.51
SPIDR-227ENST00000541342 MGAMO43451 1857 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 TOM1L1O75674 476 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 COILP38432 576 aaPredicted RBP18.24■□□□□ 0.51
SPIDR-227ENST00000541342 ELF3P78545 371 aaPredicted RBP18.24■□□□□ 0.51
SPIDR-227ENST00000541342 ZBTB8OSQ8IWT0 167 aa18.24■□□□□ 0.51
SPIDR-227ENST00000541342 RTN2O75298 545 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 IQCF3P0C7M6 154 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 RARGP13631 454 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 ITIH4Q14624 930 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 CNGA2Q16280 664 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 MAPK6Q16659 721 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 SLC13A5Q86YT5 568 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms