RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 STRNO43815 780 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
TTC39C-203ENST00000540918 NR1D1P20393 614 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 LMNB2Q03252 620 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 PSMD6Q15008 389 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 KYNUQ16719 465 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 NXNQ6DKJ4 435 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF606Q8WXB4 792 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 INPP4AQ96PE3 977 aaPredicted RBP10.07□□□□□ -0.8
TTC39C-203ENST00000540918 STARD7Q9NQZ5 370 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.07□□□□□ -0.8
TTC39C-203ENST00000540918 SAE1Q9UBE0 346 aaPredicted RBP10.07□□□□□ -0.8
TTC39C-203ENST00000540918 RGPD1P0DJD0 1748 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 CEP290O15078 2479 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 GRID2IPA4D2P6 1211 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 RRN3P2A6NIE6 340 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 NFICP08651 508 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 TMEM253P0C7T8 217 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 IRF1P10914 325 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 HSD17B4P51659 736 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 OAZ1P54368 228 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 MFSD10Q14728 455 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 P3H1Q32P28 736 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ARL13BQ3SXY8 428 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF484Q5JVG2 852 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 SPATA2LQ8IUW3 424 aaPredicted RBP10.07□□□□□ -0.8
TTC39C-203ENST00000540918 URGCPQ8TCY9 931 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 SMC6Q96SB8 1091 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 SLC13A1Q9BZW2 595 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 KCTD10Q9H3F6 313 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 MED4Q9NPJ6 270 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ATP11BQ9Y2G3 1177 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF142P52746 1687 aaPredicted RBP10.07□□□□□ -0.8
TTC39C-203ENST00000540918 SPATA31C2B4DYI2 1134 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 FARP2O94887 1054 aaPredicted RBP10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ENDOD1O94919 500 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 GARTP22102 1010 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 NDST1P52848 882 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ATP13A4Q4VNC1 1196 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ACAD10Q6JQN1 1059 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 RGMBQ6NW40 437 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF710Q8N1W2 664 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 RNF208Q9H0X6 261 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 WNT8AQ9H1J5 351 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 RAB6BQ9NRW1 208 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 RBPJLQ9UBG7 517 aa10.07□□□□□ -0.8
TTC39C-203ENST00000540918 LRRC10BA6NIK2 292 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 GOLGA8KD6RF30 607 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 CYB561D2O14569 222 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 KCNA3P22001 575 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 ERFP50548 548 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 MAP3K7CLP57077 242 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF280AP59817 542 aaPredicted RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 SP2Q02086 613 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 SPATA18Q8TC71 538 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 AGR3Q8TD06 166 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 TTC17Q96AE7 1141 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF512Q96ME7 567 aaPredicted RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 STAP1Q9ULZ2 295 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 PHRF1Q9P1Y6 1649 aaKnown RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 TAF1P21675 1872 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 RBP3P10745 1247 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 ALDH3A1P30838 453 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 HOXA7P31268 230 aaPredicted RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 CCL23P55773 120 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 CCL14Q16627 93 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 LONRF1Q17RB8 773 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 ANKRD20A3Q5VUR7 823 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 HEATR6Q6AI08 1181 aaKnown RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 IL31Q6EBC2 164 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 MAP4K3Q8IVH8 894 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 C12orf29Q8N999 325 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 SPATA20Q8TB22 786 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 FEZF2Q8TBJ5 459 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 ARHGEF2Q92974 986 aaKnown RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 PABPC5Q96DU9 382 aaKnown RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 C5P01031 1676 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 ACKR2O00590 384 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 RECQL4O94761 1208 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 MT-ND3P03897 115 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 KRT7P08729 469 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 RFX1P22670 979 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 CLK2P49760 499 aaKnown RBP10.06□□□□□ -0.8
TTC39C-203ENST00000540918 TAF6P49848 677 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 PMS2P54278 862 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 EPHB1P54762 984 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 GUCY1A3Q02108 690 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 EMBQ6PCB8 327 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 PRUNE1Q86TP1 453 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 FAM71DQ8N9W8 422 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 USP38Q8NB14 1042 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 KRT35Q92764 455 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 ERLEC1Q96DZ1 483 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 CGRRF1Q99675 332 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 SMYD3Q9H7B4 428 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 SLC12A6Q9UHW9 1150 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 CNTNAP1P78357 1384 aa10.06□□□□□ -0.8
TTC39C-203ENST00000540918 MYO7AQ13402 2215 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms