RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PNPLA4P41247 253 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 RBP5P82980 135 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 MYBPC2Q14324 1141 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 DUOXA2Q1HG44 320 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 UVSSAQ2YD98 709 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 SV2CQ496J9 727 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 ZCWPW2Q504Y3 356 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 PPM1LQ5SGD2 360 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 OVOS1Q6IE37 1185 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 RNF19BQ6ZMZ0 732 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 USP37Q86T82 979 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 RNF135Q8IUD6 432 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 OR10T2Q8NGX3 314 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 ANKRD36BP1Q96IX9 119 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 GSDMAQ96QA5 445 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 TMEM209Q96SK2 561 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 EPHX3Q9H6B9 360 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 WDR6Q9NNW5 1121 aaKnown RBP18.21■□□□□ 0.51
CD9-209ENST00000540891 OR6C75A6NL08 312 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 CALUO43852 315 aaPredicted RBP18.2■□□□□ 0.5
CD9-209ENST00000540891 KIF20AO95235 890 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 TNNC2P02585 160 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 KRT19P08727 400 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 NFIL3Q16649 462 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 ZNF658Q5TYW1 1059 aaPredicted RBP18.2■□□□□ 0.5
CD9-209ENST00000540891 WSCD1Q658N2 575 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 TPGS2Q68CL5 300 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 CCDC149Q6ZUS6 474 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 TRAPPC11Q7Z392 1133 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 FNBP1Q96RU3 617 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 OXCT2Q9BYC2 517 aaPredicted RBP18.2■□□□□ 0.5
CD9-209ENST00000540891 TSHZ2Q9NRE2 1034 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 RMND1Q9NWS8 449 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 AFF4Q9UHB7 1163 aaKnown RBP18.2■□□□□ 0.5
CD9-209ENST00000540891 CLUHO75153 1309 aa18.2■□□□□ 0.5
CD9-209ENST00000540891 ARHGEF37A1IGU5 675 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 BDP1A6H8Y1 2624 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 PI4K2BG5E9Z4 385 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 CCL16O15467 120 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 KINO60870 393 aaKnown RBP18.19■□□□□ 0.5
CD9-209ENST00000540891 N4BP1O75113 896 aaKnown RBP18.19■□□□□ 0.5
CD9-209ENST00000540891 CST3P01034 146 aaPredicted RBP18.19■□□□□ 0.5
CD9-209ENST00000540891 POU2F2P09086 479 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 CPB1P15086 417 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 TNNI1P19237 187 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 PRCPP42785 496 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 ADCY1Q08828 1119 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 BFSP1Q12934 665 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 RTL10Q7L3V2 364 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 TCEAL8Q8IYN2 117 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 PARD3BQ8TEW8 1205 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 SMARCE1Q969G3 411 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 CRISPLD1Q9H336 500 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 PIDD1Q9HB75 910 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 GDAP2Q9NXN4 497 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 MUTYHQ9UIF7 546 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 DSEQ9UL01 958 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 L1RE1Q9UN81 338 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 USTQ9Y2C2 406 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 NR2E1Q9Y466 385 aa18.19■□□□□ 0.5
CD9-209ENST00000540891 LRRIQ3A6PVS8 624 aaPredicted RBP18.18■□□□□ 0.5
CD9-209ENST00000540891 PRPF40AO75400 957 aaKnown RBP18.18■□□□□ 0.5
CD9-209ENST00000540891 SMC2O95347 1197 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 NR2F2P24468 414 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 UBE2HP62256 183 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 DLG4P78352 724 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 CLDN10P78369 228 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 NTHL1P78549 312 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 GPR17Q13304 367 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 COBLL1Q53SF7 1204 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 GRASPQ7Z6J2 395 aaPredicted RBP18.18■□□□□ 0.5
CD9-209ENST00000540891 PDCL2Q8N4E4 241 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 TDRD5Q8NAT2 981 aaKnown RBP18.18■□□□□ 0.5
CD9-209ENST00000540891 PGLYRP2Q96PD5 576 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 CYP4F11Q9HBI6 524 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 MAN1B1Q9UKM7 699 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 INSL5Q9Y5Q6 135 aa18.18■□□□□ 0.5
CD9-209ENST00000540891 PRRG1O14668 218 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 AKAP3O75969 853 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 ELF1P32519 619 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 C1orf220Q5T0J3 134 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 CEP135Q66GS9 1140 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 CLEC17AQ6ZS10 378 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 LIMS2Q7Z4I7 341 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 OSTM1Q86WC4 334 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 METTL23Q86XA0 190 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 ZDHHC14Q8IZN3 488 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 HPDLQ96IR7 371 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 ZCWPW1Q9H0M4 648 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 HCFC1R1Q9NWW0 138 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 DNMT3BQ9UBC3 853 aaKnown RBP18.17■□□□□ 0.5
CD9-209ENST00000540891 HOOK1Q9UJC3 728 aaKnown RBP18.17■□□□□ 0.5
CD9-209ENST00000540891 MAFFQ9ULX9 164 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 SNX9Q9Y5X1 595 aa18.17■□□□□ 0.5
CD9-209ENST00000540891 MTMR11A4FU01 709 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 MAPK13O15264 365 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 DCXO43602 365 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 XYLBO75191 536 aa18.16■□□□□ 0.5
CD9-209ENST00000540891 C4BPAP04003 597 aaKnown RBP18.16■□□□□ 0.5
CD9-209ENST00000540891 BMP6P22004 513 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms