RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 PER2O15055 1255 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 TEX28O15482 410 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 LINC01565O15544 149 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 VNN1O95497 513 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CXCL14O95715 111 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 STAU1O95793 577 aaKnown RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 GLP2RO95838 553 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 C4BPAP04003 597 aaKnown RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CYP11A1P05108 521 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CNPP09543 421 aaKnown RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 ODC1P11926 461 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 TYMPP19971 482 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CA8P35219 290 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 NDUFV1P49821 464 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 RBP5P82980 135 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CREMQ03060 361 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 PPP3CAQ08209 521 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 MYO1EQ12965 1108 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 KCNC3Q14003 757 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 MRPL58Q14197 206 aaKnown RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 BMS1Q14692 1282 aaKnown RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 NFKBIBQ15653 356 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CCDC85BQ15834 202 aaPredicted RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CTC1Q2NKJ3 1217 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 SKOR2Q2VWA4 1001 aaPredicted RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 DCAF17Q5H9S7 520 aaPredicted RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CT47A1Q5JQC4 288 aaPredicted RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 KIAA1841Q6NSI8 718 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 PDXDC1Q6P996 788 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 SASS6Q6UVJ0 657 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 ANKS3Q6ZW76 656 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 SV2AQ7L0J3 742 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 FRMD5Q7Z6J6 570 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 RBM23Q86U06 439 aaKnown RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CEP57Q86XR8 500 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 EFHBQ8N7U6 833 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 VN1R2Q8NFZ6 395 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 SLC35C1Q96A29 364 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 SENP8Q96LD8 212 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 KLHL5Q96PQ7 755 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 CDCA3Q99618 268 aaPredicted RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 SRRTQ9BXP5 876 aaKnown RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 EMILIN2Q9BXX0 1053 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 XYLT2Q9H1B5 865 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 TLE6Q9H808 572 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 ANO10Q9NW15 660 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 GDAP2Q9NXN4 497 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 FNIP2Q9P278 1114 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 MTRRQ9UBK8 725 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 ARMCX3Q9UH62 379 aaPredicted RBP7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 SSX2IPQ9Y2D8 614 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 GREB1Q4ZG55 1949 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 VCANP13611 3396 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 TRIOO75962 3097 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 ARHGEF37A1IGU5 675 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CYB561D2O14569 222 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 ADAM12O43184 909 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 TBC1D4O60343 1298 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CLASP2O75122 1294 aaKnown RBP7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 TBX10O75333 385 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 OAZ2O95190 189 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 GNA14O95837 355 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CST3P01034 146 aaPredicted RBP7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 ADH1AP07327 375 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 RPL17P18621 184 aaKnown RBP7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 ATICP31939 592 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 GTF2H1P32780 548 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 PIK3CAP42336 1068 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 GCLMP48507 274 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 MXI1P50539 228 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CLCN4P51793 760 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 MYL6P60660 151 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 RBM10P98175 930 aaKnown RBP7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 YWHAHQ04917 246 aaPredicted RBP7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 TYRO3Q06418 890 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 BIRC3Q13489 604 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 NCOA4Q13772 614 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 ZNF699Q32M78 642 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CCDC40Q4G0X9 1142 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CBWD6Q4V339 395 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CBWD3Q5JTY5 395 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CBWD5Q5RIA9 395 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 TCERG1LQ5VWI1 586 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 SLC8B1Q6J4K2 584 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 ZNF280DQ6N043 979 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 RSPO2Q6UXX9 243 aaPredicted RBP7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 DSTYKQ6XUX3 929 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 LIMS2Q7Z4I7 341 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 IRF2BP1Q8IU81 584 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 GLYCTKQ8IVS8 523 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 TRIM59Q8IWR1 403 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 APPL2Q8NEU8 664 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 TAS1R2Q8TE23 839 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 PPM1EQ8WY54 764 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 PABPC5Q96DU9 382 aaKnown RBP7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 HPDLQ96IR7 371 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CNOT6LQ96LI5 555 aaKnown RBP7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 CLSTN3Q9BQT9 956 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 FUCA2Q9BTY2 467 aa7.5□□□□□ -1.21
LPCAT3-209ENST00000540060 DNAJC25Q9H1X3 360 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms