RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	SNRNP35	Q16560	246 aa	Known RBP	13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	DUOXA2	Q1HG44	320 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KMT5B	Q4FZB7	885 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TRIM67	Q6ZTA4	783 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	METTL23	Q86XA0	190 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TMEM86A	Q8N2M4	240 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KIAA0895	Q8NCT3	520 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	C2orf15	Q8WU43	125 aa	Known RBP	13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	HPS3	Q969F9	1004 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TIGD1	Q96MW7	591 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SLC39A2	Q9NP94	309 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	DMAC2	Q9NW81	257 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CDH22	Q9UJ99	828 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TRAF3IP3	Q9Y228	551 aa		13.28	□□□□□ -0.28
CLTCL1-205	ENST00000538828	GOLGA6L4	A6NEF3	574 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CYB561D2	O14569	222 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	PPEF2	O14830	753 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	SPTLC1	O15269	473 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	LRG1	P02750	347 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	RPN1	P04843	607 aa	Known RBP	13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TMEM191B	P0C7N4	346 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	LAMP2	P13473	410 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GUCY2F	P51841	1108 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	EPHA5	P54756	1037 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CLDN10	P78369	228 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TFAM	Q00059	246 aa	Known RBP	13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	COBLL1	Q53SF7	1204 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	LIMS2	Q7Z4I7	341 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	THEM5	Q8N1Q8	247 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	MFSD14A	Q96MC6	490 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	KCTD10	Q9H3F6	313 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	PCIF1	Q9H4Z3	704 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	PDE11A	Q9HCR9	933 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TSHZ2	Q9NRE2	1034 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ASB3	Q9Y575	518 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	INSL5	Q9Y5Q6	135 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	NOTCH4	Q99466	2003 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ZNF318	Q5VUA4	2279 aa		13.27	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GOLGA8IP	A6NC78	632 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GOLGA8J	A6NMD2	632 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ANHX	E9PGG2	379 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	PRRG1	O14668	218 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ZNF197	O14709	1029 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	STAU1	O95793	577 aa	Known RBP	13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TNNC2	P02585	160 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ITGB3	P05106	788 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CPB1	P15086	417 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	PTPN2	P17706	415 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	FSHR	P23945	695 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CASP1	P29466	404 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TSC2	P49815	1807 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	WNT7B	P56706	349 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	MCCD1	P59942	119 aa	Predicted RBP	13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CYP24A1	Q07973	514 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ADCY1	Q08828	1119 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	MYO1E	Q12965	1108 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CBWD2	Q8IUF1	395 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GRAMD1C	Q8IYS0	662 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ELMOD1	Q8N336	334 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GUF1	Q8N442	669 aa	Known RBP	13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CSGALNACT2	Q8N6G5	542 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TOP6BL	Q8N6T0	577 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ZSWIM2	Q8NEG5	633 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ENGASE	Q8NFI3	743 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GSDMA	Q96QA5	445 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	FNBP1	Q96RU3	617 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CGRRF1	Q99675	332 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GOLPH3L	Q9H4A5	285 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CYP4F11	Q9HBI6	524 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GDE1	Q9NZC3	331 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	LIMD1	Q9UGP4	676 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	HOOK1	Q9UJC3	728 aa	Known RBP	13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CDH7	Q9ULB5	785 aa		13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.26	□□□□□ -0.29
CLTCL1-205	ENST00000538828	HUS1	O60921	280 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	N4BP1	O75113	896 aa	Known RBP	13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	POLR2B	P30876	1174 aa	Known RBP	13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ATIC	P31939	592 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	GBP2	P32456	591 aa	Predicted RBP	13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	LHX1	P48742	406 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TUFM	P49411	452 aa	Known RBP	13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	NUBP1	P53384	320 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	FAM160A1	Q05DH4	1040 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	TDG	Q13569	410 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	PABPC1L	Q4VXU2	614 aa	Known RBP	13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	IQCE	Q6IPM2	695 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CENPP	Q6IPU0	288 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	RNF19B	Q6ZMZ0	732 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	MTSS1L	Q765P7	747 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	NELFCD	Q8IXH7	590 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	DCP1B	Q8IZD4	617 aa	Known RBP	13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	SPATA20	Q8TB22	786 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	SPPL2B	Q8TCT7	592 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ASIC4	Q96FT7	647 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	CHAMP1	Q96JM3	812 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	MYADM	Q96S97	322 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ACBD6	Q9BR61	282 aa		13.25	□□□□□ -0.29
CLTCL1-205	ENST00000538828	ZCWPW1	Q9H0M4	648 aa		13.25	□□□□□ -0.29

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