RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MEFVO15553 781 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CYP26A1O43174 497 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CCP110O43303 1012 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ITGB8P26012 769 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LRPAP1P30533 357 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 RAP1GAPP47736 663 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ALDH7A1P49419 539 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PDE6CP51160 858 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 BTG3Q14201 252 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZNF394Q53GI3 561 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 HS1BP3Q53T59 392 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CLLU1OSQ5K130 101 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LRRC43Q8N309 656 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TXLNBQ8N3L3 684 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FAXDC2Q96IV6 333 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 DNAJC7Q99615 494 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 AAASQ9NRG9 546 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TBC1D13Q9NVG8 400 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PRG3Q9Y2Y8 225 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 A8MXQ7 604 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 RNF225M0QZC1 329 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ARHGAP6O43182 974 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 THAP12O43422 761 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MED7O43513 233 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KIF4AO95239 1232 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 STAU1O95793 577 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ODC1P11926 461 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 GNL1P36915 607 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 EIF4A3P38919 411 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 GATMP50440 423 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 AFF1P51825 1210 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CDH8P55286 799 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 LILRA4P59901 499 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 WDR5P61964 334 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SOX4Q06945 474 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TCTN1Q2MV58 587 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KIAA1328Q86T90 577 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 THEM5Q8N1Q8 247 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 RBBP8NLQ8NC74 664 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 HASPINQ8TF76 798 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 BAP1Q92560 729 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KAT5Q92993 513 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TOP1MTQ969P6 601 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 HEXIM2Q96MH2 286 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CASD1Q96PB1 797 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TTYH3Q9C0H2 523 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NHEJ1Q9H9Q4 299 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 APOBEC3GQ9HC16 384 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CISHQ9NSE2 258 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 AIPL1Q9NZN9 384 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CEP83Q9Y592 693 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TET1Q8NFU7 2136 aa11.39□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ANO9A1A5B4 782 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CARNS1A5YM72 827 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PPEF2O14830 753 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ZSCAN12O43309 604 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PDGFRBP09619 1106 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PNMA6AP0CW24 399 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 GNA15P30679 374 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CA8P35219 290 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KRT83P78385 493 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CEP57Q86XR8 500 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ZNF280BQ86YH2 543 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CCDC170Q8IYT3 715 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ADGRF2Q8IZF7 708 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TMEM130Q8N3G9 435 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 GSTCDQ8NEC7 633 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SHC3Q92529 594 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SENP8Q96LD8 212 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KREMEN1Q96MU8 473 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ARID3AQ99856 593 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 AGPAT1Q99943 283 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NT5C1AQ9BXI3 368 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 HAUS4Q9H6D7 363 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SMYD3Q9H7B4 428 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 AJAP1Q9UKB5 411 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DSEQ9UL01 958 aa11.38□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MICAL3Q7RTP6 2002 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SOWAHDA6NJG2 315 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DGKIO75912 1065 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DDHD2O94830 711 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 LHX1P48742 406 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 JAM2P57087 298 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DEFB103AP81534 67 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CDK17Q00537 523 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ELAVL2Q12926 359 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 UPP1Q16831 310 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KIAA1841Q6NSI8 718 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 COLGALT2Q8IYK4 626 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 FAM71AQ8IYT1 594 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TMEM86AQ8N2M4 240 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 FIBCD1Q8N539 461 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TOP6BLQ8N6T0 577 aa11.37□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TMEM176AQ96HP8 235 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms