RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 CAMK1Q14012 370 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
PEX11B-203ENST00000537888 CLLU1OSQ5K130 101 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 KRT39Q6A163 491 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 GPD1LQ8N335 351 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 CASD1Q96PB1 797 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 C11orf84Q9BUA3 381 aaPredicted RBP13.8□□□□□ -0.2
PEX11B-203ENST00000537888 ANKZF1Q9H8Y5 726 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 FAM53CQ9NYF3 392 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 RNF14Q9UBS8 474 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 PIN4Q9Y237 131 aaKnown RBP13.8□□□□□ -0.2
PEX11B-203ENST00000537888 BDP1A6H8Y1 2624 aa13.8□□□□□ -0.2
PEX11B-203ENST00000537888 CCDC151A5D8V7 595 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 TBKBP1A7MCY6 615 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 PHKA2P46019 1235 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 AMHR2Q16671 573 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 CREG2Q8IUH2 290 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 HNRNPLLQ8WVV9 542 aaKnown RBP13.79□□□□□ -0.2
PEX11B-203ENST00000537888 ATXN2LQ8WWM7 1075 aaKnown RBP13.79□□□□□ -0.2
PEX11B-203ENST00000537888 POMGNT1Q8WZA1 660 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 TLR10Q9BXR5 811 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 NFKBIZQ9BYH8 718 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 CWH43Q9H720 699 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 ZNF446Q9NWS9 450 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 NCOR1O75376 2440 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 GOLGA8IPA6NC78 632 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 GOLGA8JA6NMD2 632 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 LRRIQ3A6PVS8 624 aaPredicted RBP13.79□□□□□ -0.2
PEX11B-203ENST00000537888 HNRNPDLO14979 420 aaKnown RBP13.79□□□□□ -0.2
PEX11B-203ENST00000537888 HOXA2O43364 376 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 EXTL3O43909 919 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 ZNF623O75123 536 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 EOMESO95936 686 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 ITGB1P05556 798 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 H2AFZP0C0S5 128 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 MBTD1Q05BQ5 628 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 STRN3Q13033 797 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 ENOX2Q16206 610 aaKnown RBP13.79□□□□□ -0.2
PEX11B-203ENST00000537888 PTPROQ16827 1216 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 UBXN11Q5T124 520 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 SLFN12LQ6IEE8 588 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 TMCO3Q6UWJ1 677 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 H2AFVQ71UI9 128 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 LNX1Q8TBB1 728 aaPredicted RBP13.79□□□□□ -0.2
PEX11B-203ENST00000537888 SAAL1Q96ER3 474 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 OSBPL9Q96SU4 736 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 MMS19Q96T76 1030 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 PACSIN1Q9BY11 444 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 LMAN2LQ9H0V9 348 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
PEX11B-203ENST00000537888 ZNF233A6NK53 670 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 MEIS3P2A8K0S8 358 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 FOXN3O00409 490 aaPredicted RBP13.78□□□□□ -0.2
PEX11B-203ENST00000537888 CES2O00748 559 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 TSPAN1O60635 241 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 SRGAP2O75044 1071 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 ZC3H11AO75152 810 aaKnown RBP eCLIP13.78□□□□□ -0.2
PEX11B-203ENST00000537888 PALMO75781 387 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 DNAJB1P25685 340 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 COL19A1Q14993 1142 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 PSMD6Q15008 389 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 PCBP1Q15365 356 aaKnown RBP eCLIP13.78□□□□□ -0.2
PEX11B-203ENST00000537888 TIGD5Q53EQ6 642 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 MEI1Q5TIA1 1274 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 TWF2Q6IBS0 349 aaKnown RBP13.78□□□□□ -0.2
PEX11B-203ENST00000537888 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 C15orf39Q6ZRI6 1047 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 KLHL23Q8NBE8 558 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 DEPTORQ8TB45 409 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 FAM81BQ96LP2 452 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 COL25A1Q9BXS0 654 aaPredicted RBP13.78□□□□□ -0.2
PEX11B-203ENST00000537888 UBE2TQ9NPD8 197 aaPredicted RBP13.78□□□□□ -0.2
PEX11B-203ENST00000537888 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
PEX11B-203ENST00000537888 NCANO14594 1321 aa13.77□□□□□ -0.2
PEX11B-203ENST00000537888 TARSL2A2RTX5 802 aaKnown RBP13.77□□□□□ -0.21
PEX11B-203ENST00000537888 GRID2IPA4D2P6 1211 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 PDE2AO00408 941 aaPredicted RBP13.77□□□□□ -0.21
PEX11B-203ENST00000537888 BUB1O43683 1085 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 TMEM253P0C7T8 217 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 LIG4P49917 911 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 RAB27AP51159 221 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 TFF2Q03403 129 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 TFDP1Q14186 410 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 TCEAL1Q15170 157 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 CDCA2Q69YH5 1023 aaPredicted RBP13.77□□□□□ -0.21
PEX11B-203ENST00000537888 CC2D1AQ6P1N0 951 aaPredicted RBP13.77□□□□□ -0.21
PEX11B-203ENST00000537888 SLFN11Q7Z7L1 901 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 FAM71AQ8IYT1 594 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 LRRC43Q8N309 656 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
PEX11B-203ENST00000537888 FBXL13Q8NEE6 735 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 SPPL3Q8TCT6 385 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 BICD1Q96G01 975 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 CALR3Q96L12 384 aaKnown RBP13.77□□□□□ -0.21
PEX11B-203ENST00000537888 ASB2Q96Q27 587 aa13.77□□□□□ -0.21
PEX11B-203ENST00000537888 EPC1Q9H2F5 836 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms