RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TGFB1I1O43294 461 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 KLRC4O43908 158 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 VNN2O95498 520 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 MYL1P05976 194 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 OR4Q2P0C623 313 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ODC1P11926 461 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 CPB1P15086 417 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PAX3P23760 479 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ADCY1Q08828 1119 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 TDGQ13569 410 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 OVOS1Q6IE37 1185 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 RNF19BQ6ZMZ0 732 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 BORCS6Q96GS4 357 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 FAM84AQ96KN4 292 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 MFSD14AQ96MC6 490 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 HOOK1Q9UJC3 728 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 INSL5Q9Y5Q6 135 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PDGFBP01127 241 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 LRG1P02750 347 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 CYP11A1P05108 521 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 TAF6P49848 677 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 TFAMQ00059 246 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PABPC1LQ4VXU2 614 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 SCARA3Q6AZY7 606 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 C1orf127Q8N9H9 656 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ITFG1Q8TB96 612 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 NOC3LQ8WTT2 800 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 OXCT2Q9BYC2 517 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PDE11AQ9HCR9 933 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 SLC39A2Q9NP94 309 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 HSPBP1Q9NZL4 362 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 DUSP12Q9UNI6 340 aa19.29■□□□□ 0.68
TNFRSF1A-209ENST00000536717 UBE4BO95155 1302 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 OR6C75A6NL08 312 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 CBWD2Q8IUF1 395 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 NELFCDQ8IXH7 590 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 FBXL6Q8N531 539 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 CXorf38Q8TB03 319 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 FGF13Q92913 245 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 TMEM209Q96SK2 561 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 CDH7Q9ULB5 785 aa19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ARIH1Q9Y4X5 557 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ZFP37Q9Y6Q3 630 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ANHXE9PGG2 379 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 MBD3O95983 291 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 RHOP08100 348 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PTMSP20962 102 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 GPR17Q13304 367 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 BMT2Q1RMZ1 405 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 SLC5A9Q2M3M2 681 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ST13P5Q8NFI4 369 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PGLYRP2Q96PD5 576 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 CRISPLD1Q9H336 500 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 AGPAT3Q9NRZ7 376 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 MAFFQ9ULX9 164 aa19.27■□□□□ 0.68
TNFRSF1A-209ENST00000536717 DENND4CQ5VZ89 1909 aa19.27■□□□□ 0.67
TNFRSF1A-209ENST00000536717 KPNA7A9QM74 516 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 TULP1O00294 542 aaPredicted RBP19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CYB561D2O14569 222 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CLIC2O15247 247 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 NARSO43776 548 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ITGB3P05106 788 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PTPN2P17706 415 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 POLR2BP30876 1174 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 HTR4Q13639 388 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 MYBPC2Q14324 1141 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 LMBRD2Q68DH5 695 aaPredicted RBP19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SLC44A3Q8N4M1 653 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 OR10T2Q8NGX3 314 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CACTINQ8WUQ7 758 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 NXPE3Q969Y0 559 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ZNF560Q96MR9 790 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 RTP3Q9BQQ7 232 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 AVENQ9NQS1 362 aaPredicted RBP19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PTPRJQ12913 1337 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CACNA1HO95180 2353 aa19.26■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ZNF233A6NK53 670 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 TWF1Q12792 350 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 STK4Q13043 487 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SV2CQ496J9 727 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 WSCD1Q658N2 575 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 POTEHQ6S545 545 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 NPAS3Q8IXF0 933 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ELOA2Q8IYF1 753 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 KIAA0895Q8NCT3 520 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 FGF14Q92915 247 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 MTMR12Q9C0I1 747 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CEP72Q9P209 647 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SIX4Q9UIU6 781 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 DSEQ9UL01 958 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 AGAP1Q9UPQ3 857 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 NUMBLQ9Y6R0 609 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 MTMR11A4FU01 709 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PNPLA4P41247 253 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 VCPP55072 806 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SNRPFP62306 86 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 DUSP4Q13115 394 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 KMT5BQ4FZB7 885 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PRSS36Q5K4E3 855 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CENPPQ6IPU0 288 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms