RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 MAGEC3Q8TD91 643 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ATXN2LQ8WWM7 1075 aaKnown RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 CCT6BQ92526 530 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 SLCO2A1Q92959 643 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ARMC5Q96C12 935 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 MASTLQ96GX5 879 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 SPACA7Q96KW9 195 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 PCDHB18PQ96TA0 734 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ZSWIM1Q9BR11 485 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 MXRA8Q9BRK3 442 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 TIPINQ9BVW5 301 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 TEKT3Q9BXF9 490 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 OSBPL7Q9BZF2 842 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 ADAM7Q9H2U9 754 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 TMEM206Q9H813 350 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 POLD4Q9HCU8 107 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 BRD7Q9NPI1 651 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 HERC5Q9UII4 1024 aaKnown RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 DBR1Q9UK59 544 aaKnown RBP6.14□□□□□ -1.43
VPS33A-203ENST00000536212 RPTORQ8N122 1335 aa6.14□□□□□ -1.43
VPS33A-203ENST00000536212 SCO2A0A1W2PP80 73 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ARHGEF35A5YM69 484 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 CCT8L1PA6NM43 557 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 DCDC2CA8MYV0 355 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 DNM1LO00429 736 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 CHUKO15111 745 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 EXOC3O60645 756 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 XYLBO75191 536 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 CFBP00751 764 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 FTLP02792 175 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 SHBGP04278 402 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 GSTA1P08263 222 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 RARGP13631 454 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ABCB4P21439 1286 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 GNA15P30679 374 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 COILP38432 576 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 RPL21P46778 160 aaKnown RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 HSD17B4P51659 736 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 GSCP56915 257 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 GTF2BQ00403 316 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 SATB1Q01826 763 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 PPP3CAQ08209 521 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 IFFO1Q0D2I5 559 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 CETN1Q12798 172 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 IKQ13123 557 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 XRCC4Q13426 336 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ITIH4Q14624 930 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ZKSCAN8Q15776 578 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ANKRD20A8PQ5CZ79 823 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 RNF187Q5TA31 235 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 DENND2CQ68D51 928 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 STYK1Q6J9G0 422 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 MFSD5Q6N075 450 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 TTC27Q6P3X3 843 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 FIGNL1Q6PIW4 674 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 RHBDF2Q6PJF5 856 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 RPAINQ86UA6 219 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 SLC13A5Q86YT5 568 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC13Q8IYE1 715 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 RPUSD2Q8IZ73 545 aaKnown RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 FBXO25Q8TCJ0 367 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 PLEKHO2Q8TD55 490 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 CHURC1Q8WUH1 139 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 SLC20A1Q8WUM9 679 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 PSPC1Q8WXF1 523 aaKnown RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 SHC3Q92529 594 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 KRT35Q92764 455 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 GLG1Q92896 1179 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ART4Q93070 314 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 HOOK2Q96ED9 719 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 CHMP6Q96FZ7 201 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 FRMD6Q96NE9 622 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ACCSQ96QU6 501 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ZNF577Q9BSK1 485 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ROPN1BQ9BZX4 212 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 TMX4Q9H1E5 349 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 CENPHQ9H3R5 247 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 LRRC19Q9H756 370 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 DBNDD1Q9H9R9 158 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ELP3Q9H9T3 547 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ROPN1Q9HAT0 212 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 LRRC4CQ9HCJ2 640 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 SLC40A1Q9NP59 571 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 UBE2TQ9NPD8 197 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 C11orf16Q9NQ32 467 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 TMOD4Q9NZQ9 345 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 LARSQ9P2J5 1176 aaKnown RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 MTRF1LQ9UGC7 380 aaKnown RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 FOXD3Q9UJU5 478 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 NOCTQ9UK39 431 aaKnown RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 PNMA2Q9UL42 364 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ATP8A1Q9Y2Q0 1164 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 SNX24Q9Y343 169 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 COQ4Q9Y3A0 265 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 UBIAD1Q9Y5Z9 338 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 EMSYQ7Z589 1322 aa6.13□□□□□ -1.43
VPS33A-203ENST00000536212 ZNF646O15015 1829 aaPredicted RBP6.13□□□□□ -1.43
VPS33A-203ENST00000536212 GOLGA6L7A0A1B0GV03 622 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 H0YHG0 523 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms