RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 RTP3Q9BQQ7 232 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 CUEDC2Q9H467 287 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 ZHX3Q9H4I2 956 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 AGO2Q9UKV8 859 aaKnown RBP11.71□□□□□ -0.53
CCDC60-202ENST00000535685 EXOC7Q9UPT5 735 aa11.71□□□□□ -0.53
CCDC60-202ENST00000535685 A0A087X0B3 334 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 SMAPO00193 183 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 SPTLC2O15270 562 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 NARSO43776 548 aaKnown RBP11.7□□□□□ -0.54
CCDC60-202ENST00000535685 IL18RAPO95256 599 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 LRG1P02750 347 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 CYP11A1P05108 521 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 RHOP08100 348 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 GARTP22102 1010 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 STAT6P42226 847 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 EPHA5P54756 1037 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 LILRA4P59901 499 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 NTHL1P78549 312 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 CEBPZQ03701 1054 aaKnown RBP11.7□□□□□ -0.54
CCDC60-202ENST00000535685 YWHAHQ04917 246 aaPredicted RBP11.7□□□□□ -0.54
CCDC60-202ENST00000535685 SPAG1Q07617 926 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 GPR17Q13304 367 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 TMEM132DQ14C87 1099 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 STK38Q15208 465 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 PRSS36Q5K4E3 855 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 ADALQ6DHV7 355 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 JADE1Q6IE81 842 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 CRELD2Q6UXH1 353 aaPredicted RBP11.7□□□□□ -0.54
CCDC60-202ENST00000535685 NPAS3Q8IXF0 933 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 LEMD2Q8NC56 503 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 ITFG1Q8TB96 612 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 ACCSQ96QU6 501 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 LRRC27Q9C0I9 530 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 TNMDQ9H2S6 317 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 MFSD1Q9H3U5 465 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 MRPL44Q9H9J2 332 aaKnown RBP11.7□□□□□ -0.54
CCDC60-202ENST00000535685 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 HSFX1Q9UBD0 423 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 INSL5Q9Y5Q6 135 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 NUMBLQ9Y6R0 609 aa11.7□□□□□ -0.54
CCDC60-202ENST00000535685 KRBA1A5PL33 1030 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 PRRG1O14668 218 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 ZNF197O14709 1029 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 KIAA0391O15091 583 aaKnown RBP11.69□□□□□ -0.54
CCDC60-202ENST00000535685 CUTAO60888 179 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 SEC24AO95486 1093 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 LDHAP00338 332 aaKnown RBP11.69□□□□□ -0.54
CCDC60-202ENST00000535685 ACOT2P49753 483 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 C9orf57Q5W0N0 161 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 PARM1Q6UWI2 310 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 SIX5Q8N196 739 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 FGF14Q92915 247 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 CYP4F11Q9HBI6 524 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 HCFC1R1Q9NWW0 138 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 FBXL21Q9UKT6 434 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 DSEQ9UL01 958 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 POLIQ9UNA4 740 aa11.69□□□□□ -0.54
CCDC60-202ENST00000535685 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
CCDC60-202ENST00000535685 ZNF638Q14966 1978 aaKnown RBP11.68□□□□□ -0.54
CCDC60-202ENST00000535685 EP300Q09472 2414 aaPredicted RBP11.68□□□□□ -0.54
CCDC60-202ENST00000535685 TISP43B9A030 160 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 PROB1E7EW31 1015 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 PPEF2O14830 753 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 ECI2O75521 394 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 VNN2O95498 520 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 NFICP08651 508 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 ODC1P11926 461 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 MRE11P49959 708 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 GUCY2FP51841 1108 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 STARD6P59095 220 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 ADCY1Q08828 1119 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 KCNA1Q09470 495 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 SLC5A9Q2M3M2 681 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 OVOS1Q6IE37 1185 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 DSTYKQ6XUX3 929 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 RNF19BQ6ZMZ0 732 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 USP37Q86T82 979 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 ALYREFQ86V81 257 aaKnown RBP11.68□□□□□ -0.54
CCDC60-202ENST00000535685 HSCBQ8IWL3 235 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 BRSK2Q8IWQ3 736 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 CCDC65Q8IXS2 484 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 GPR152Q8TDT2 470 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 POMGNT1Q8WZA1 660 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 BORCS6Q96GS4 357 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 SENP8Q96LD8 212 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 RPP25Q9BUL9 199 aaKnown RBP11.68□□□□□ -0.54
CCDC60-202ENST00000535685 TMEM206Q9H813 350 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 MAGEF1Q9HAY2 307 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 PANK4Q9NVE7 773 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 DPP3Q9NY33 737 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
CCDC60-202ENST00000535685 NUP210Q8TEM1 1887 aaPredicted RBP11.68□□□□□ -0.54
CCDC60-202ENST00000535685 SPTLC1O15269 473 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 GCNT3O95395 438 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 F13A1P00488 732 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 CFHP08603 1231 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 ZSCAN22P10073 491 aaPredicted RBP11.67□□□□□ -0.54
CCDC60-202ENST00000535685 IDEP14735 1019 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms