RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 THAP12O43422 761 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 FTLP02792 175 aaPredicted RBP21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SCNN1GP51170 649 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 YWHAEP62258 255 aaKnown RBP21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ORC1Q13415 861 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ANKRD33Q7Z3H0 272 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ECHDC2Q86YB7 292 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 WHAMMQ8TF30 809 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CYP3A43Q9HB55 503 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 RGS18Q9NS28 235 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 INTUQ9ULD6 942 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SCN5AQ14524 2016 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SPTLC1O15269 473 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 COL6A1P12109 1028 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PKN2Q16513 984 aaKnown RBP21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TRIM60Q495X7 471 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ZNF606Q8WXB4 792 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TWNKQ96RR1 684 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ZSWIM1Q9BR11 485 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 THAP2Q9H0W7 228 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 RSAD1Q9HA92 442 aa21.7■■□□□ 1.06
TNFRSF1A-205ENST00000534885 RTN2O75298 545 aa21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CILPO75339 1184 aa21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 THP07101 528 aa21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 GZMAP12544 262 aa21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 BRD2P25440 801 aaKnown RBP21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 GJA8P48165 433 aa21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CTCFP49711 727 aaPredicted RBP21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 FAAP100Q0VG06 881 aa21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TANC1Q9C0D5 1861 aa21.69■■□□□ 1.06
TNFRSF1A-205ENST00000534885 BTNL10A8MVZ5 291 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 C9IYK1 514 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TERF1P54274 439 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 RAD23BP54727 409 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NAP1L1P55209 391 aaKnown RBP21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TLE2Q04725 743 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CLEC16AQ2KHT3 1053 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ZNF598Q86UK7 904 aaKnown RBP21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PASD1Q8IV76 773 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CTNNBL1Q8WYA6 563 aaPredicted RBP21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TFAP2BQ92481 460 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TDRD15B5MCY1 1934 aaKnown RBP21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ANKRD62A6NC57 917 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TMEM253P0C7T8 217 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 UNGP13051 313 aaPredicted RBP21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 IGFBP6P24592 240 aaPredicted RBP21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 LRPAP1P30533 357 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 RNF10Q8N5U6 811 aaKnown RBP21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TRIM58Q8NG06 486 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ARHGEF26Q96DR7 871 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CYFIP2Q96F07 1278 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NOX5Q96PH1 765 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ELOVL4Q9GZR5 314 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PDCL3Q9H2J4 239 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 HIPK3Q9H422 1215 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SLC38A7Q9NVC3 462 aa21.68■■□□□ 1.06
TNFRSF1A-205ENST00000534885 DCDC2CA8MYV0 355 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TACC1O75410 805 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SKIP12755 728 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 INCA1Q0VD86 236 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SLC24A5Q71RS6 500 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SLC4A11Q8NBS3 891 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 DBF4BQ8NFT6 615 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PGBD4Q96DM1 585 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SCLYQ96I15 445 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ZNF560Q96MR9 790 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 BARX2Q9UMQ3 279 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CTAGE9A4FU28 777 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 KPNA7A9QM74 516 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ENC1O14682 589 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 URI1O94763 535 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CYP1A1P04798 512 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TAF6P49848 677 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NDST1P52848 882 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PLEKHG4Q58EX7 1191 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NAA35Q5VZE5 725 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CPA5Q8WXQ8 436 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NAPGQ99747 312 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 MRPL45Q9BRJ2 306 aaKnown RBP21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PPP1R12CQ9BZL4 782 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TSPYL2Q9H2G4 693 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 INPP5FQ9Y2H2 1132 aa21.67■■□□□ 1.06
TNFRSF1A-205ENST00000534885 POMCP01189 267 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PNPLA4P41247 253 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CCL23P55773 120 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 LILRA4P59901 499 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SOWAHAQ2M3V2 549 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ACAD10Q6JQN1 1059 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 WNT8AQ9H1J5 351 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 OSGEPQ9NPF4 335 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NCANO14594 1321 aa21.66■■□□□ 1.06
TNFRSF1A-205ENST00000534885 A0A0A6YYK5 440 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 RIOK3O14730 519 aaKnown RBP21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CD19P15391 556 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NOMO3P69849 1222 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 RFFLQ8WZ73 363 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 RABGGTAQ92696 567 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TMEM176AQ96HP8 235 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TOX2Q96NM4 488 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PAAF1Q9BRP4 392 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms