RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 HIPK4Q8NE63 616 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 TBC1D16Q8TBP0 767 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 GRAPLQ8TC17 118 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 SMCR8Q8TEV9 937 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 MAML3Q96JK9 1138 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 QRSL1Q9H0R6 528 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 ARNT2Q9HBZ2 717 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 OBP2AQ9NY56 170 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 DTLQ9NZJ0 730 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 DBR1Q9UK59 544 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 USP18Q9UMW8 372 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 EDARQ9UNE0 448 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 INVSQ9Y283 1065 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 GPR45Q9Y5Y3 372 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC4A7Q9Y6M7 1214 aa5.58□□□□□ -1.52
ECHDC1-223ENST00000534442 IBTKQ9P2D0 1353 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 HEG1Q9ULI3 1381 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 GOLGA6CA6NDK9 693 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 GOLGA6BA6NDN3 693 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 VSTM5A8MXK1 200 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 IL33O95760 270 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 PRLP01236 227 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 FGBP02675 491 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 GOLGA6DP0CG33 693 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 C5AR1P21730 350 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 CYP2C19P33261 490 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 STAT5AP42229 794 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 AFMP43652 599 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 ALDH6A1Q02252 535 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 PLEKHN1Q494U1 663 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 TTC38Q5R3I4 469 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 ADGRF1Q5T601 910 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 CD276Q5ZPR3 534 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 CCDC62Q6P9F0 684 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 KANSL1Q7Z3B3 1105 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 TOE1Q96GM8 510 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 INTS4Q96HW7 963 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC2A13Q96QE2 648 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 TUBGCP5Q96RT8 1024 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 NUP88Q99567 741 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 AMNQ9BXJ7 453 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC12A5Q9H2X9 1139 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 PCMTD2Q9NV79 361 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 UCKL1Q9NWZ5 548 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 GOLGA6AQ9NYA3 693 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 RBPJLQ9UBG7 517 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 KCNG1Q9UIX4 513 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 WASF3Q9UPY6 502 aa5.57□□□□□ -1.52
ECHDC1-223ENST00000534442 UBN2Q6ZU65 1347 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 ECM29Q5VYK3 1845 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 MBTPS2O43462 519 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 PEX14O75381 377 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 LPLP06858 475 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 OSMP13725 252 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 YBX1P67809 324 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC6A3Q01959 620 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 GTF2H3Q13889 308 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 HLTFQ14527 1009 aaKnown RBP eCLIP5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 RRP1BQ14684 758 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 CCL14Q16627 93 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 CR1LQ2VPA4 569 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 RRP12Q5JTH9 1297 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 DACT2Q5SW24 774 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 SUSD4Q5VX71 490 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 TIGD7Q6NT04 549 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 TEPPQ6URK8 271 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 DGKHQ86XP1 1220 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC41A1Q8IVJ1 513 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 CCAR1Q8IX12 1150 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 ABI1Q8IZP0 508 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 TTC5Q8N0Z6 440 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 TMEM199Q8N511 208 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 FAM26EQ8N5C1 309 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 SUMF1Q8NBK3 374 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 E2F7Q96AV8 911 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 PABPC5Q96DU9 382 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 CLIP3Q96DZ5 547 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 KIRREL1Q96J84 757 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 AIFM3Q96NN9 605 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 FOXB1Q99853 325 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 TEX13AQ9BXU3 409 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC39A2Q9NP94 309 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 IL23AQ9NPF7 189 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 TUBD1Q9UJT1 453 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 PCDHAC2Q9Y5I4 1007 aa5.56□□□□□ -1.52
ECHDC1-223ENST00000534442 NBPF19A0A087WUL8 3843 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 APOL3O95236 402 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 NTSR2O95665 410 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 KRT18P05783 430 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 ASGR2P07307 311 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 PFKMP08237 780 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 VCAM1P19320 739 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 PTGS1P23219 599 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 GPTP24298 496 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 RGS3P49796 1198 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 RHBDL3P58872 404 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 MRPS9P82933 396 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 PPATQ06203 517 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 ADCY2Q08462 1091 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms