RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 MYO7AQ13402 2215 aa15.12■□□□□ 0.01
CMTM1-218ENST00000533915 F8W810 466 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 CXCL14O95715 111 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 COPB1P53618 953 aaKnown RBP15.11■□□□□ 0.01
CMTM1-218ENST00000533915 YWHAEP62258 255 aaKnown RBP15.11■□□□□ 0.01
CMTM1-218ENST00000533915 NOP14P78316 857 aaKnown RBP15.11■□□□□ 0.01
CMTM1-218ENST00000533915 YWHAHQ04917 246 aaPredicted RBP15.11■□□□□ 0.01
CMTM1-218ENST00000533915 GRIN2CQ14957 1233 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 EXOC3L4Q17RC7 722 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 ZNF280DQ6N043 979 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 CD300LGQ6UXG3 332 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 SPRED2Q7Z698 418 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 RNF168Q8IYW5 571 aaPredicted RBP15.11■□□□□ 0.01
CMTM1-218ENST00000533915 RIN2Q8WYP3 895 aaPredicted RBP15.11■□□□□ 0.01
CMTM1-218ENST00000533915 PIK3R5Q8WYR1 880 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 FAM84AQ96KN4 292 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 NT5C1BQ96P26 610 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 ZBP1Q9H171 429 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 XYLT2Q9H1B5 865 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 VPS16Q9H269 839 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 FAM124BQ9H5Z6 455 aaPredicted RBP15.11■□□□□ 0.01
CMTM1-218ENST00000533915 CHST7Q9NS84 486 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 GCNT4Q9P109 453 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 NXF1Q9UBU9 619 aaKnown RBP15.11■□□□□ 0.01
CMTM1-218ENST00000533915 IRAK3Q9Y616 596 aa15.11■□□□□ 0.01
CMTM1-218ENST00000533915 PLXNA4Q9HCM2 1894 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.1■□□□□ 0.01
CMTM1-218ENST00000533915 I3L4J1 428 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 SPTLC1O15269 473 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 EFEMP2O95967 443 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 CYP11A1P05108 521 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 TBXAS1P24557 533 aaPredicted RBP15.1■□□□□ 0.01
CMTM1-218ENST00000533915 LHX1P48742 406 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 VARS2Q5ST30 1063 aaKnown RBP15.1■□□□□ 0.01
CMTM1-218ENST00000533915 OVOS1Q6IE37 1185 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 DEFB123Q8N688 67 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 MRPL43Q8N983 215 aaKnown RBP15.1■□□□□ 0.01
CMTM1-218ENST00000533915 EHBP1Q8NDI1 1231 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 NIF3L1Q9GZT8 377 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 SNX25Q9H3E2 840 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 CYP3A43Q9HB55 503 aa15.1■□□□□ 0.01
CMTM1-218ENST00000533915 EPOPA6NHQ4 379 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 OR6C75A6NL08 312 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 LGALS16A8MUM7 142 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 C2CD2LO14523 706 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 FSCN2O14926 492 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 TACC1O75410 805 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 OAZ2O95190 189 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 ADH1AP07327 375 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 PCSK1P29120 753 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 TKTP29401 623 aaKnown RBP15.09■□□□□ 0.01
CMTM1-218ENST00000533915 FXR1P51114 621 aaKnown RBP eCLIP15.09■□□□□ 0.01
CMTM1-218ENST00000533915 ERVFC1P60507 584 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 UBXN1Q04323 297 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 PSMD5Q16401 504 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 MIIPQ5JXC2 388 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 KIAA0319Q5VV43 1072 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 PLPP4Q5VZY2 271 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 ELMSAN1Q6PJG2 1045 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 TAS1R1Q7RTX1 841 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 PPFIBP1Q86W92 1011 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 ADGRF2Q8IZF7 708 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 RNF214Q8ND24 703 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 FAM161BQ96MY7 647 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 VN1R3Q9BXE9 311 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 INTS2Q9H0H0 1204 aaKnown RBP15.09■□□□□ 0.01
CMTM1-218ENST00000533915 HSD3B7Q9H2F3 369 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 FNIP2Q9P278 1114 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 DPP7Q9UHL4 492 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 BACE2Q9Y5Z0 518 aa15.09■□□□□ 0.01
CMTM1-218ENST00000533915 RFXAPO00287 272 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 CBFA2T2O43439 604 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 SLC34A2O95436 690 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 ATP1A3P13637 1013 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 POU3F3P20264 500 aaPredicted RBP15.08■□□□□ 0
CMTM1-218ENST00000533915 IGFBP4P22692 258 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 DNAJB1P25685 340 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 NDUFV1P49821 464 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 TSPY1Q01534 308 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 PTPN14Q15678 1187 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 CTXN3Q4LDR2 81 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 RTP2Q5QGT7 225 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 WSCD1Q658N2 575 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 SMYD5Q6GMV2 418 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 ENOSF1Q7L5Y1 443 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 TMEM130Q8N3G9 435 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 PDCL2Q8N4E4 241 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 SEMA4DQ92854 862 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 PCMTD1Q96MG8 357 aaPredicted RBP15.08■□□□□ 0
CMTM1-218ENST00000533915 CDCA3Q99618 268 aaPredicted RBP15.08■□□□□ 0
CMTM1-218ENST00000533915 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 NSUN3Q9H649 340 aaKnown RBP15.08■□□□□ 0
CMTM1-218ENST00000533915 DAAM1Q9Y4D1 1078 aa15.08■□□□□ 0
CMTM1-218ENST00000533915 PRRC2BQ5JSZ5 2229 aaKnown RBP15.07■□□□□ 0
CMTM1-218ENST00000533915 C2orf71A6NGG8 1288 aa15.07■□□□□ 0
CMTM1-218ENST00000533915 NCK2O43639 380 aa15.07■□□□□ 0
CMTM1-218ENST00000533915 C1RP00736 705 aa15.07■□□□□ 0
CMTM1-218ENST00000533915 SRGAP2BP0DMP2 458 aa15.07■□□□□ 0
CMTM1-218ENST00000533915 RFX1P22670 979 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms