RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ANKS1AQ92625 1134 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 LPAR1Q92633 364 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 MAGEB18Q96M61 343 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 MYLK2Q9H1R3 596 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 NPHS2Q9NP85 383 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 TIMMDC1Q9NPL8 285 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 ETNK2Q9NVF9 386 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 PCDH10Q9P2E7 1040 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 ANAPC5Q9UJX4 755 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 AGAP1Q9UPQ3 857 aa7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 REXO2Q9Y3B8 237 aaKnown RBP7.15□□□□□ -1.27
TGFBR3-209ENST00000532540 CNTNAP1P78357 1384 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 A0A1W2PQJ5 194 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 CHRNA3P32297 505 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 ABL2P42684 1182 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 INHBEP58166 350 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 CDK17Q00537 523 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 ITGA7Q13683 1181 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 DNAL1Q4LDG9 190 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 RARS2Q5T160 578 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 TRMT10CQ7L0Y3 403 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 CYFIP1Q7L576 1253 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 NLRP9Q7RTR0 991 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 RDH13Q8NBN7 331 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 EPS8L3Q8TE67 593 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 BHMTQ93088 406 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 THTPAQ9BU02 230 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 PAIP1Q9H074 479 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 SPATC1LQ9H0A9 340 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 SMAPO00193 183 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 VWA5AO00534 786 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 GFPT2O94808 682 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 ASMTLO95671 621 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 KLRC1P26715 233 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 SARSP49591 514 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 MDM2Q00987 491 aaPredicted RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 HIC1Q14526 733 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 NAB2Q15742 525 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 NT5DC1Q5TFE4 455 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 KLHDC7AQ5VTJ3 777 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 NELFCDQ8IXH7 590 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 BRI3BPQ8WY22 251 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 RSPH1Q8WYR4 309 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 TUBGCP5Q96RT8 1024 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 MRPL1Q9BYD6 325 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 PLGRKTQ9HBL7 147 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 CEP72Q9P209 647 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 ANKFY1Q9P2R3 1169 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 PHTF1Q9UMS5 762 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 USP54Q70EL1 1684 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 KRT36O76013 467 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 CBX6O95503 412 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 RPL5P46777 297 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 USP11P51784 963 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 TPD52P55327 224 aaPredicted RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 OCRLQ01968 901 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 PPATQ06203 517 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 TMEM62Q0P6H9 643 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 MTMR1Q13613 665 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 EARS2Q5JPH6 523 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 FKBP1CQ5VVH2 108 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 CST9Q5W186 159 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 RNF43Q68DV7 783 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 PIGWQ7Z7B1 504 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 SCAIQ8N9R8 606 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 CALML6Q8TD86 181 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 ATP2A3Q93084 1043 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 VPS50Q96JG6 964 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 ZFRQ96KR1 1074 aaKnown RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 SERPINB12Q96P63 405 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 LRMDAQ9H2I8 198 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 MAGEF1Q9HAY2 307 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 IFT122Q9HBG6 1241 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 FAM217BQ9NTX9 383 aaPredicted RBP7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 BARHL2Q9NY43 387 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 PTTG2Q9NZH5 202 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 SELENONQ9NZV5 590 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 KIAA1024Q9UPX6 916 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 SHANK3Q9BYB0 1731 aa7.14□□□□□ -1.27
TGFBR3-209ENST00000532540 A8MXQ7 604 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 GOLGA8TH3BQL2 631 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 TBCAO75347 108 aaKnown RBP7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 PGM3O95394 542 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 MYL3P08590 195 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 TXNP10599 105 aaKnown RBP7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 RPL13P26373 211 aaKnown RBP7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 MAN1A1P33908 653 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 GJC1P36383 396 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 MAGEA10P43363 369 aaPredicted RBP7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 CCR3P51677 355 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 BPIFB4P59827 614 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 TMEM132BQ14DG7 1078 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 SPRED3Q2MJR0 410 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 MTERF2Q49AM1 385 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 TAF1BQ53T94 588 aaPredicted RBP7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 XKR9Q5GH70 373 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 SPRYD7Q5W111 196 aa7.13□□□□□ -1.27
TGFBR3-209ENST00000532540 TMEM53Q6P2H8 277 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms