RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PID1Q7Z2X4 250 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 ZNF410Q86VK4 478 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 ADGRF2Q8IZF7 708 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 UBA3Q8TBC4 463 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 STK33Q9BYT3 514 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 CPSF2Q9P2I0 782 aaKnown RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 G3BP2Q9UN86 482 aaKnown RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 MED24O75448 989 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 LHX1P48742 406 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 CCL23P55773 120 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 MRPS25P82663 173 aaKnown RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 OCRLQ01968 901 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 NDFIP2Q9NV92 336 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 RHBDL3P58872 404 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 PABPC5Q96DU9 382 aaKnown RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 SERPINI1Q99574 410 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 EEF2KO00418 725 aaKnown RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 TOMM70O94826 608 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 LUC7L3O95232 432 aaKnown RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 TMPRSS15P98073 1019 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 FAM110CQ1W6H9 321 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 TTC17Q96AE7 1141 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 BFARQ9NZS9 450 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 ZDHHC9Q9Y397 364 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 KPNA7A9QM74 516 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 MAPK13O15264 365 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 MGEA5O60502 916 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 RNASEH1O60930 286 aaKnown RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 ESRRAP11474 423 aaPredicted RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 MX2P20592 715 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 ATICP31939 592 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 SH3BGRP55822 239 aaPredicted RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 FAM133BQ5BKY9 247 aaKnown RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 CES5AQ6NT32 575 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 WDR75Q8IWA0 830 aaKnown RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 VGLL2Q8N8G2 317 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 OR6P1Q8NGX9 317 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 CPA5Q8WXQ8 436 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 TRIM54Q9BYV2 358 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 RASA4BC9J798 803 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 GOLGA8MH3BSY2 632 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 RASA4O43374 803 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 DPYDQ12882 1025 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 NUGGCQ68CJ6 796 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 ZBTB18Q99592 522 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 TSSK1BQ9BXA7 367 aa11.87□□□□□ -0.51
PTPRK-221ENST00000532331 LIMA1Q9UHB6 759 aaKnown RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.87□□□□□ -0.51
PTPRK-221ENST00000532331 FAM187AA6NFU0 413 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 P4HA2O15460 535 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 GRIK5Q16478 980 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 THEMIS2Q5TEJ8 643 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 BHMTQ93088 406 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 NRCAMQ92823 1304 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 CTIFO43310 598 aaKnown RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 NCK2O43639 380 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 ESRRBO95718 433 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 STK4Q13043 487 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 ZNF177Q13360 481 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 PPM1LQ5SGD2 360 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 SLC27A1Q6PCB7 646 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 ADSSL1Q8N142 457 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 RSAD1Q9HA92 442 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 SNTG2Q9NY99 539 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 UBA6A0AVT1 1052 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 WTIPA6NIX2 430 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 BTBD19C9JJ37 291 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 ELNP15502 786 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 ACO1P21399 889 aaKnown RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 KPNA1P52294 538 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 PMS2P54278 862 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 PTPAQ15257 358 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 CELF3Q5SZQ8 465 aaKnown RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 ADAM2Q99965 735 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 CYP39A1Q9NYL5 469 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 CSDE1O75534 798 aaKnown RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 KRT14P02533 472 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 GPS1Q13098 491 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 FAM171A1Q5VUB5 890 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 CLEC17AQ6ZS10 378 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 TRIM59Q8IWR1 403 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 TTC8Q8TAM2 541 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 PITPNM3Q9BZ71 974 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 SUN2Q9UH99 717 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 DBR1Q9UK59 544 aaKnown RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 RIC1Q4ADV7 1423 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 A0A087WUV0 522 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-221ENST00000532331 GRAP2O75791 330 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 CTNNB1P35222 781 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 SLC1A1P43005 524 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms