RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 DHX8Q14562 1220 aaKnown RBP16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 LARP1BQ659C4 914 aaKnown RBP16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 TPRG1Q6ZUI0 275 aa16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 USP37Q86T82 979 aa16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 MYCT1Q8N699 235 aa16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 WNT2BQ93097 391 aa16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 TCEAL4Q96EI5 215 aa16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 ZNF512Q96ME7 567 aaPredicted RBP16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 ZFP14Q9HCL3 533 aa16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 LTB4R2Q9NPC1 389 aa16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 ASAH2Q9NR71 780 aa16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 SPATA6Q9NWH7 488 aaPredicted RBP16.52■□□□□ 0.24
DEPDC7-204ENST00000532078 FANCMQ8IYD8 2048 aa16.52■□□□□ 0.23
DEPDC7-204ENST00000532078 FAM170BA6NMN3 283 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 LACTBL1A8MY62 500 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 FAM189A1O60320 539 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 OAZ2O95190 189 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 PLCG1P19174 1290 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 FCARP24071 287 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 CCR2P41597 374 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 AARSP49588 968 aaKnown RBP eCLIP16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 PLD1Q13393 1074 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 ZBTB6Q15916 424 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 ENOX2Q16206 610 aaKnown RBP16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 FAM78AQ5JUQ0 283 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 ZBTB41Q5SVQ8 909 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 TANGO2Q6ICL3 276 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 RNF19BQ6ZMZ0 732 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 TTC13Q8NBP0 860 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 BEST2Q8NFU1 509 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 RAD54LQ92698 747 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 ASB16Q96NS5 453 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 NELL2Q99435 816 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 MSTO1Q9BUK6 570 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 PLA2G2FQ9BZM2 168 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 BLOC1S4Q9NUP1 217 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 CEP72Q9P209 647 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 FBXO4Q9UKT5 387 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 MRPS17Q9Y2R5 130 aaKnown RBP16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 YIPF1Q9Y548 306 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 DMXL1Q9Y485 3027 aa16.51■□□□□ 0.23
DEPDC7-204ENST00000532078 A0A0B4J269 797 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 OR6C75A6NL08 312 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 NCAM2O15394 837 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 TRAK2O60296 914 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 CD72P21854 359 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 PAX3P23760 479 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 EPHA5P54756 1037 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 FOXK2Q01167 660 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 MCM6Q14566 821 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 KARSQ15046 597 aaKnown RBP16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 ZNF528Q3MIS6 628 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 DSTYKQ6XUX3 929 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 ZNF852Q6ZMS4 543 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 MAP4K3Q8IVH8 894 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 CD302Q8IX05 232 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 LRRC15Q8TF66 581 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 SMARCD2Q92925 531 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 ZHX3Q9H4I2 956 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 BRD9Q9H8M2 597 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 HEBP1Q9NRV9 189 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 MTF2Q9Y483 593 aaPredicted RBP16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 TIMM13Q9Y5L4 95 aaPredicted RBP16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 CACNA1IQ9P0X4 2223 aa16.5■□□□□ 0.23
DEPDC7-204ENST00000532078 ADRB2P07550 413 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 ODC1P11926 461 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 MYL4P12829 197 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 TYMPP19971 482 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 TARSP26639 723 aaKnown RBP16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 RPS9P46781 194 aaKnown RBP16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 GRM2Q14416 872 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 SPATA1Q5VX52 437 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 OVOS1Q6IE37 1185 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 MAML2Q8IZL2 1156 aaPredicted RBP16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 TMEM130Q8N3G9 435 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 TATDN2Q93075 761 aa16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 TRMT61BQ9BVS5 477 aaKnown RBP16.49■□□□□ 0.23
DEPDC7-204ENST00000532078 OTOGLQ3ZCN5 2332 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 TSC2P49815 1807 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 OR4Q2P0C623 313 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 EPHB3P54753 998 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 GTF2BQ00403 316 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 GPR17Q13304 367 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 MYBPC2Q14324 1141 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 TMEM132DQ14C87 1099 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 JADE1Q6IE81 842 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 GPIHBP1Q8IV16 184 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 DEPDC1BQ8WUY9 529 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 IRF7Q92985 503 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 CLDN23Q96B33 292 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 BORCS6Q96GS4 357 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 PGLYRP2Q96PD5 576 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
DEPDC7-204ENST00000532078 GPR88Q9GZN0 384 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms