RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 R4GN57 208 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 COL4A2P08572 1712 aa18.23■□□□□ 0.51
CPSF1-207ENST00000531727 MTMR11A4FU01 709 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 MYMKA6NI61 221 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 PPP1R37O75864 691 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 CYP11A1P05108 521 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 GJA1P17302 382 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 TARSP26639 723 aaKnown RBP18.22■□□□□ 0.51
CPSF1-207ENST00000531727 ALDH1A3P47895 512 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 EPHB3P54753 998 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 GRM2Q14416 872 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 ARMCX5Q6P1M9 558 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 ZC3H14Q6PJT7 736 aaKnown RBP18.22■□□□□ 0.51
CPSF1-207ENST00000531727 CRELD2Q6UXH1 353 aaPredicted RBP18.22■□□□□ 0.51
CPSF1-207ENST00000531727 SV2BQ7L1I2 683 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 TMC8Q8IU68 726 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 MAML2Q8IZL2 1156 aaPredicted RBP18.22■□□□□ 0.51
CPSF1-207ENST00000531727 SHKBP1Q8TBC3 707 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 POMGNT1Q8WZA1 660 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 DNAJC19Q96DA6 116 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 INTS4Q96HW7 963 aaKnown RBP18.22■□□□□ 0.51
CPSF1-207ENST00000531727 NELL2Q99435 816 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 TRMT61BQ9BVS5 477 aaKnown RBP18.22■□□□□ 0.51
CPSF1-207ENST00000531727 STRA6Q9BX79 667 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 LRRC3Q9BY71 257 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 DNAJC25Q9H1X3 360 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 IKZF4Q9H2S9 585 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 TRPV4Q9HBA0 871 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 HEBP1Q9NRV9 189 aa18.22■□□□□ 0.51
CPSF1-207ENST00000531727 MORC2Q9Y6X9 1032 aaPredicted RBP18.22■□□□□ 0.51
CPSF1-207ENST00000531727 LMNAP02545 664 aaKnown RBP18.21■□□□□ 0.51
CPSF1-207ENST00000531727 GAP43P17677 238 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 ADSSP30520 456 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.51
CPSF1-207ENST00000531727 POSTNQ15063 836 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 TEAD2Q15562 447 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 VITQ6UXI7 678 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 ZNF852Q6ZMS4 543 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 ZSCAN18Q8TBC5 510 aaPredicted RBP18.21■□□□□ 0.51
CPSF1-207ENST00000531727 CLDN23Q96B33 292 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 TMEM209Q96SK2 561 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 GPR88Q9GZN0 384 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 BRD9Q9H8M2 597 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 MRPL44Q9H9J2 332 aaKnown RBP18.21■□□□□ 0.51
CPSF1-207ENST00000531727 SPATA6Q9NWH7 488 aaPredicted RBP18.21■□□□□ 0.51
CPSF1-207ENST00000531727 DPP3Q9NY33 737 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 HSFX1Q9UBD0 423 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 DSEQ9UL01 958 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 FANCMQ8IYD8 2048 aa18.21■□□□□ 0.51
CPSF1-207ENST00000531727 TCHHQ07283 1943 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 SHISA7A6NL88 538 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 NCAM2O15394 837 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 PSMC3P17980 439 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 VIPR2P41587 438 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 TAF6P49848 677 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 CCDC73Q6ZRK6 1079 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 TTC9BQ8N6N2 239 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 ATAD1Q8NBU5 361 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 OR10T2Q8NGX3 314 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 KCNG4Q8TDN1 519 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 DEPDC1BQ8WUY9 529 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 IRF7Q92985 503 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 USP28Q96RU2 1077 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 TRPV5Q9NQA5 729 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 FBXO4Q9UKT5 387 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 EXOC7Q9UPT5 735 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 SLC27A5Q9Y2P5 690 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 MRPS17Q9Y2R5 130 aaKnown RBP18.2■□□□□ 0.5
CPSF1-207ENST00000531727 ASB3Q9Y575 518 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 SCN1AP35498 2009 aa18.2■□□□□ 0.5
CPSF1-207ENST00000531727 TICRRQ7Z2Z1 1910 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 A0A1W2PRU2 124 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 LAMTOR5O43504 91 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 IL18RAPO95256 599 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 GDI1P31150 447 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 STAT6P42226 847 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 RPS9P46781 194 aaKnown RBP18.19■□□□□ 0.5
CPSF1-207ENST00000531727 KCNA1Q09470 495 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 SLC39A14Q15043 492 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 ZNF528Q3MIS6 628 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 L1TD1Q5T7N2 865 aaKnown RBP18.19■□□□□ 0.5
CPSF1-207ENST00000531727 METTL23Q86XA0 190 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 NT5DC4Q86YG4 428 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 MFSD6LQ8IWD5 586 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 EFCAB13Q8IY85 973 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 PSMG2Q969U7 264 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 E2F7Q96AV8 911 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 ACCSQ96QU6 501 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 PYM1Q9BRP8 204 aaKnown RBP18.19■□□□□ 0.5
CPSF1-207ENST00000531727 ZCWPW1Q9H0M4 648 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 ZSCAN16Q9H4T2 348 aaPredicted RBP18.19■□□□□ 0.5
CPSF1-207ENST00000531727 SLITRK6Q9H5Y7 841 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 ZNF334Q9HCZ1 680 aaPredicted RBP18.19■□□□□ 0.5
CPSF1-207ENST00000531727 OLFML3Q9NRN5 406 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 TBC1D7Q9P0N9 293 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 NCANO14594 1321 aa18.19■□□□□ 0.5
CPSF1-207ENST00000531727 A0A087X0B3 334 aa18.18■□□□□ 0.5
CPSF1-207ENST00000531727 MAN2B1O00754 1011 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms