RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 BRIP1Q9BX63 1249 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 PACSIN1Q9BY11 444 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 BHMT2Q9H2M3 363 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 GPR45Q9Y5Y3 372 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 KAT6AQ92794 2004 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 LATS1O95835 1130 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 NPTX2P47972 431 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 CCT8P50990 548 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 GYS2P54840 703 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 HLXQ14774 488 aaPredicted RBP6.13□□□□□ -1.43
PTPRK-220ENST00000531466 GPR162Q16538 588 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 MORN5Q5VZ52 161 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 SLC17A8Q8NDX2 589 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 JKAMPQ9P055 326 aa6.13□□□□□ -1.43
PTPRK-220ENST00000531466 TARM1B6A8C7 271 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 BRINP1O60477 761 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 STAT4Q14765 748 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 SLC9A4Q6AI14 798 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 TAPT1Q6NXT6 567 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 TMPRSS9Q7Z410 1059 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 NEK8Q86SG6 692 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 RFKQ969G6 155 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 SH2D3AQ9BRG2 576 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 SEMA4CQ9C0C4 833 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 TDP1Q9NUW8 608 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 TBC1D30Q9Y2I9 924 aa6.12□□□□□ -1.43
PTPRK-220ENST00000531466 MOSPD3O75425 235 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 PRKD3O94806 890 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 CCT4P50991 539 aaKnown RBP6.11□□□□□ -1.43
PTPRK-220ENST00000531466 PIGFQ07326 219 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 FHL1Q13642 323 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 SUPT20HL1Q3ZLR7 823 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 ZNF365Q70YC5 407 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 IL17RDQ8NFM7 739 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 IFI44Q8TCB0 444 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 DENND1AQ8TEH3 1009 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 QTRT1Q9BXR0 403 aaKnown RBP6.11□□□□□ -1.43
PTPRK-220ENST00000531466 PCDHA13Q9Y5I0 950 aa6.11□□□□□ -1.43
PTPRK-220ENST00000531466 A0A0B4J269 797 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 SLC43A1O75387 559 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 CD1AP06126 327 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 CYP2D6P10635 497 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 AGXTP21549 392 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 TUBB3Q13509 450 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 SLC44A4Q53GD3 710 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 FAM9AQ8IZU1 332 aaPredicted RBP6.1□□□□□ -1.43
PTPRK-220ENST00000531466 FKBP10Q96AY3 582 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 TRIB1Q96RU8 372 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 TPSD1Q9BZJ3 242 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 SH3BP4Q9P0V3 963 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 DKK3Q9UBP4 350 aa6.1□□□□□ -1.43
PTPRK-220ENST00000531466 ZNF280AP59817 542 aaPredicted RBP6.09□□□□□ -1.43
PTPRK-220ENST00000531466 POU6F2P78424 691 aaPredicted RBP6.09□□□□□ -1.43
PTPRK-220ENST00000531466 FAPQ12884 760 aa6.09□□□□□ -1.43
PTPRK-220ENST00000531466 PROSER3Q2NL68 480 aa6.09□□□□□ -1.43
PTPRK-220ENST00000531466 SLC18B1Q6NT16 456 aa6.09□□□□□ -1.43
PTPRK-220ENST00000531466 SLC2A7Q6PXP3 512 aa6.09□□□□□ -1.43
PTPRK-220ENST00000531466 LHFPL2Q6ZUX7 228 aa6.09□□□□□ -1.43
PTPRK-220ENST00000531466 TECPR1Q7Z6L1 1165 aa6.09□□□□□ -1.43
PTPRK-220ENST00000531466 WACQ9BTA9 647 aa6.09□□□□□ -1.43
PTPRK-220ENST00000531466 CAAP1Q9H8G2 361 aa6.09□□□□□ -1.43
PTPRK-220ENST00000531466 ZNF277Q9NRM2 450 aaPredicted RBP6.09□□□□□ -1.43
PTPRK-220ENST00000531466 E7ENX8 843 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 F5H697 171 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 ENPP3O14638 875 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 NHLRC4P0CG21 123 aaPredicted RBP6.08□□□□□ -1.44
PTPRK-220ENST00000531466 ZFXP17010 805 aaPredicted RBP6.08□□□□□ -1.44
PTPRK-220ENST00000531466 CERS1P27544 350 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 SOX5P35711 763 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
PTPRK-220ENST00000531466 CDC42EP1Q00587 391 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 TAP2Q03519 686 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 CEP78Q5JTW2 689 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 SLC30A10Q6XR72 485 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 RGMAQ96B86 450 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 SMOQ99835 787 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 ALG8Q9BVK2 526 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 EHD3Q9NZN3 535 aa6.08□□□□□ -1.44
PTPRK-220ENST00000531466 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.08□□□□□ -1.44
PTPRK-220ENST00000531466 E9PLN8 166 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 SMIM22K7EJ46 135 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 NTN1O95631 604 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 PCSK6P29122 969 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 TAF7LQ5H9L4 462 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.07□□□□□ -1.44
PTPRK-220ENST00000531466 CRELD2Q6UXH1 353 aaPredicted RBP6.07□□□□□ -1.44
PTPRK-220ENST00000531466 MIGA2Q7L4E1 593 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 AFAP1L2Q8N4X5 818 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTPRK-220ENST00000531466 COG1Q8WTW3 980 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 VKORC1Q9BQB6 163 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 ACTRT3Q9BYD9 372 aa6.07□□□□□ -1.44
PTPRK-220ENST00000531466 TISP43B9A030 160 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 POLRMTO00411 1230 aaKnown RBP6.06□□□□□ -1.44
PTPRK-220ENST00000531466 PPP6CO00743 305 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 WASP42768 502 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 NDUFV1P49821 464 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 TBCCQ15814 346 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 CT47A1Q5JQC4 288 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms