RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZNF280BQ86YH2 543 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 PPM1KQ8N3J5 372 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 OR5B17Q8NGF7 314 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 C18orf25Q96B23 403 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-211ENST00000528787 SENP8Q96LD8 212 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 CEP295NLQ96MC4 621 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 MED15Q96RN5 788 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 POP1Q99575 1024 aaKnown RBP8.49□□□□□ -1.05
SSBP3-211ENST00000528787 ACBD6Q9BR61 282 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 INTS2Q9H0H0 1204 aaKnown RBP8.49□□□□□ -1.05
SSBP3-211ENST00000528787 TLR9Q9NR96 1032 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 ZNHIT6Q9NWK9 470 aaKnown RBP8.49□□□□□ -1.05
SSBP3-211ENST00000528787 MIOSQ9NXC5 875 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 FNIP2Q9P278 1114 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 HSFX1Q9UBD0 423 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 NXF1Q9UBU9 619 aaKnown RBP8.49□□□□□ -1.05
SSBP3-211ENST00000528787 IRAK3Q9Y616 596 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 BZW2Q9Y6E2 419 aaKnown RBP8.49□□□□□ -1.05
SSBP3-211ENST00000528787 KIAA1671Q9BY89 1806 aa8.49□□□□□ -1.05
SSBP3-211ENST00000528787 SCN1AP35498 2009 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 A0A1W2PQJ5 194 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 PAEPP09466 180 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CTSAP10619 480 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 FGFR3P22607 806 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 WARSP23381 471 aaKnown RBP8.48□□□□□ -1.05
SSBP3-211ENST00000528787 PON1P27169 355 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 GNL1P36915 607 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-211ENST00000528787 DSG1Q02413 1049 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 TAP1Q03518 808 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 PLD1Q13393 1074 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 GPM6BQ13491 265 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CUL2Q13617 745 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 GSE1Q14687 1217 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 NR1I3Q14994 352 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CBWD6Q4V339 395 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 HSP90AA4PQ58FG1 418 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CBWD3Q5JTY5 395 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CBWD5Q5RIA9 395 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 TPGS2Q68CL5 300 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CNGA4Q8IV77 575 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 ADGRF2Q8IZF7 708 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 KLHL23Q8NBE8 558 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 MSANTD4Q8NCY6 345 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 ZSWIM2Q8NEG5 633 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 MICAL1Q8TDZ2 1067 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 TAS1R2Q8TE23 839 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 ZNF516Q92618 1163 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 GAS2L1Q99501 681 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-211ENST00000528787 NT5C1AQ9BXI3 368 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 BCO2Q9BYV7 579 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 MIS12Q9H081 205 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 ZNF576Q9H609 170 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 UBE2TQ9NPD8 197 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-211ENST00000528787 ENTPD7Q9NQZ7 604 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 IFNKQ9P0W0 207 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CEP72Q9P209 647 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 IMPACTQ9P2X3 320 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 DNAJB4Q9UDY4 337 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 SIX4Q9UIU6 781 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CDH9Q9ULB4 789 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 BARX2Q9UMQ3 279 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-211ENST00000528787 PLAGL2Q9UPG8 496 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 COLQQ9Y215 455 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-211ENST00000528787 CEP83Q9Y592 693 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 BACE2Q9Y5Z0 518 aa8.48□□□□□ -1.05
SSBP3-211ENST00000528787 A8MXQ7 604 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 CST3P01034 146 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-211ENST00000528787 ATP1A3P13637 1013 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 UCHL3P15374 230 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 ANXA13P27216 316 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 CDC25BP30305 580 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 ELF1P32519 619 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 STAT1P42224 750 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 NDUFV1P49821 464 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 GATMP50440 423 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 RABGGTBP53611 331 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 PTK2Q05397 1052 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 SOX4Q06945 474 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-211ENST00000528787 INCA1Q0VD86 236 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 MEA1Q16626 185 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 C1orf220Q5T0J3 134 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 LMBRD2Q68DH5 695 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-211ENST00000528787 CEP57Q86XR8 500 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 ZNF677Q86XU0 584 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 DRC7Q8IY82 874 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 VPS52Q8N1B4 723 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 OR6B3Q8NGW1 331 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 PLEKHO2Q8TD55 490 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 HDAC7Q8WUI4 952 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 FUBP3Q96I24 572 aaKnown RBP eCLIP8.47□□□□□ -1.05
SSBP3-211ENST00000528787 STK33Q9BYT3 514 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 XYLT2Q9H1B5 865 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 RBSNQ9H1K0 784 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 HSD3B7Q9H2F3 369 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 NKX2-4Q9H2Z4 354 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 GRPEL1Q9HAV7 217 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 GOLGA2P5Q9HBQ8 144 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 ABCB6Q9NP58 842 aa8.47□□□□□ -1.05
SSBP3-211ENST00000528787 CHST7Q9NS84 486 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms