RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CFAP52Q8N1V2 620 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 PROKR1Q8TCW9 393 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 SCAMP4Q969E2 229 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 VKORC1Q9BQB6 163 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 TMEM60Q9H2L4 133 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 FAM204AQ9H8W3 233 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 RLIMQ9NVW2 624 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 VSX1Q9NZR4 365 aaPredicted RBP7.27□□□□□ -1.25
PCF11-202ENST00000528336 ZDHHC8Q9ULC8 765 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 AGAP1Q9UPQ3 857 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 CENPVL1A0A0U1RR11 272 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 GNAI2P04899 355 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 AGFG1P52594 562 aaKnown RBP7.26□□□□□ -1.25
PCF11-202ENST00000528336 ZXDAP98168 799 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 GORABQ5T7V8 394 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 KCNV1Q6PIU1 500 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 USP37Q86T82 979 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 Q8N1X5 172 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 LENG9Q96B70 501 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 ADAM2Q99965 735 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 MLST8Q9BVC4 326 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 GPR35Q9HC97 309 aa7.26□□□□□ -1.25
PCF11-202ENST00000528336 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.26□□□□□ -1.25
PCF11-202ENST00000528336 CAPN8A6NHC0 703 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 TMEM200CA6NKL6 621 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 MARCH11A6NNE9 402 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 VPS4BO75351 444 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 ABHD16AO95870 558 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 KITP10721 976 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 MAKP20794 623 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 BMPR1AP36894 532 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 GUCY1B3Q02153 619 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 TP53BP2Q13625 1128 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 HABP2Q14520 560 aaPredicted RBP7.25□□□□□ -1.25
PCF11-202ENST00000528336 SLC30A10Q6XR72 485 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 CCDC149Q6ZUS6 474 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 NACC2Q96BF6 587 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 TIFAQ96CG3 184 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 MED15Q96RN5 788 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 ZMAT3Q9HA38 289 aaKnown RBP7.25□□□□□ -1.25
PCF11-202ENST00000528336 PRDM11Q9NQV5 511 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 MRPS18AQ9NVS2 196 aaKnown RBP7.25□□□□□ -1.25
PCF11-202ENST00000528336 KCNE5Q9UJ90 142 aa7.25□□□□□ -1.25
PCF11-202ENST00000528336 A0A1W2PPL8 197 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 CFAP69A5D8W1 941 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 FAM227AF5H4B4 570 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 POLRMTO00411 1230 aaKnown RBP7.24□□□□□ -1.25
PCF11-202ENST00000528336 PPFIA4O75335 1185 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 CDKL5O76039 1030 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 ZFPL1O95159 310 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 KIF20AO95235 890 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 SPDEFO95238 335 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 GPSM2P81274 684 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 PIGFQ07326 219 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 GBX1Q14549 363 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 LY6G5CQ5SRR4 150 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 TAPT1Q6NXT6 567 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 RHOUQ7L0Q8 258 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 KIAA0319LQ8IZA0 1049 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 FAM43AQ8N2R8 423 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 LRIG1Q96JA1 1093 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 TRIB1Q96RU8 372 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 P2RX7Q99572 595 aaKnown RBP7.24□□□□□ -1.25
PCF11-202ENST00000528336 SMOQ99835 787 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 TINAGL1Q9GZM7 467 aaPredicted RBP7.24□□□□□ -1.25
PCF11-202ENST00000528336 GALNT9Q9HCQ5 603 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 L1RE1Q9UN81 338 aa7.24□□□□□ -1.25
PCF11-202ENST00000528336 EIF4G1Q04637 1599 aaKnown RBP7.24□□□□□ -1.25
PCF11-202ENST00000528336 M0QYG6 137 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 FZD7O75084 574 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 FSHBP01225 129 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 ADH4P08319 380 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 MCM7P33993 719 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 ABHD18Q0P651 414 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 PTPAQ15257 358 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 CNN3Q15417 329 aaKnown RBP7.23□□□□□ -1.25
PCF11-202ENST00000528336 CYP2A13Q16696 494 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 GEN1Q17RS7 908 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 KIAA0753Q2KHM9 967 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 SWSAP1Q6NVH7 229 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 MAEAQ7L5Y9 396 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 Q8NA96 180 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 FAM156AQ8NDB6 213 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 BOD1Q96IK1 185 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 C8orf48Q96LL4 319 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 WDR11Q9BZH6 1224 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 ATP6V0A4Q9HBG4 840 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 PIH1D1Q9NWS0 290 aaKnown RBP7.23□□□□□ -1.25
PCF11-202ENST00000528336 CTTNBP2NLQ9P2B4 639 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 DKK2Q9UBU2 259 aa7.23□□□□□ -1.25
PCF11-202ENST00000528336 CCDC195A0A1B0GUA6 201 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 CHEK2O96017 543 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 FOSP01100 380 aaPredicted RBP7.22□□□□□ -1.25
PCF11-202ENST00000528336 KCNA2P16389 499 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 USP14P54578 494 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 FPGSQ05932 587 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 CD300EQ496F6 205 aaPredicted RBP7.22□□□□□ -1.25
PCF11-202ENST00000528336 HSP90AB2PQ58FF8 381 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 DGKHQ86XP1 1220 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms