RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GPR17Q13304 367 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 FOXD4L6Q3SYB3 417 aaPredicted RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 SV2CQ496J9 727 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 ZBTB41Q5SVQ8 909 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 RESP18Q5W5W9 173 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 OVOS1Q6IE37 1185 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 CRELD2Q6UXH1 353 aaPredicted RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 FOXD4L3Q6VB84 417 aaPredicted RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 UNC13DQ70J99 1090 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 GET4Q7L5D6 327 aaPredicted RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 C2orf15Q8WU43 125 aaKnown RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 CCDC34Q96HJ3 373 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 SENP8Q96LD8 212 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 ZNF560Q96MR9 790 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 MYADMQ96S97 322 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 GPR88Q9GZN0 384 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 SCAND2PQ9GZW5 306 aaPredicted RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 RBAKQ9NYW8 714 aaPredicted RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 FBXL21Q9UKT6 434 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 MRPS23Q9Y3D9 190 aaKnown RBP10.38□□□□□ -0.75
CHD7-208ENST00000528280 ASB3Q9Y575 518 aa10.38□□□□□ -0.75
CHD7-208ENST00000528280 UBE4BO95155 1302 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 KPNA7A9QM74 516 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 CYB561D2O14569 222 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 PRPF40AO75400 957 aaKnown RBP10.37□□□□□ -0.75
CHD7-208ENST00000528280 PRPF6O94906 941 aaKnown RBP10.37□□□□□ -0.75
CHD7-208ENST00000528280 FGF19O95750 216 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 NFICP08651 508 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 SRFP11831 508 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 EPHB3P54753 998 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 RBP5P82980 135 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 DNM1Q05193 864 aaKnown RBP10.37□□□□□ -0.75
CHD7-208ENST00000528280 KCNA1Q09470 495 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 DUOXA2Q1HG44 320 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 FAM26FQ5R3K3 315 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 ASTLQ6HA08 431 aaPredicted RBP10.37□□□□□ -0.75
CHD7-208ENST00000528280 HS2ST1Q7LGA3 356 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 BRSK2Q8IWQ3 736 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 GPD1LQ8N335 351 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 GOLGA5Q8TBA6 731 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 SPATA18Q8TC71 538 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 FGF13Q92913 245 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 CCDC47Q96A33 483 aaKnown RBP10.37□□□□□ -0.75
CHD7-208ENST00000528280 SHDQ96IW2 340 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 SPATA32Q96LK8 384 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 RTP3Q9BQQ7 232 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 DNMT3BQ9UBC3 853 aaKnown RBP10.37□□□□□ -0.75
CHD7-208ENST00000528280 ITGA11Q9UKX5 1188 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 INSL5Q9Y5Q6 135 aa10.37□□□□□ -0.75
CHD7-208ENST00000528280 TISP43B9A030 160 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 TULP1O00294 542 aaPredicted RBP10.36□□□□□ -0.75
CHD7-208ENST00000528280 STK25O00506 426 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
CHD7-208ENST00000528280 HUS1O60921 280 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 N4BP1O75113 896 aaKnown RBP10.36□□□□□ -0.75
CHD7-208ENST00000528280 KIF20AO95235 890 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 RHOP08100 348 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 CASP5P51878 434 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 TFAMQ00059 246 aaKnown RBP10.36□□□□□ -0.75
CHD7-208ENST00000528280 PFKPQ01813 784 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 MYO1EQ12965 1108 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 HTR4Q13639 388 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 RNF19BQ6ZMZ0 732 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 PDZD4Q76G19 769 aaPredicted RBP10.36□□□□□ -0.75
CHD7-208ENST00000528280 EPM2AIP1Q7L775 607 aaPredicted RBP10.36□□□□□ -0.75
CHD7-208ENST00000528280 DPH6Q7L8W6 267 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 ITIH5Q86UX2 942 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 DCP1BQ8IZD4 617 aaKnown RBP10.36□□□□□ -0.75
CHD7-208ENST00000528280 TMEM86AQ8N2M4 240 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 CSGALNACT2Q8N6G5 542 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 LRRC52Q8N7C0 313 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 E2F7Q96AV8 911 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 ANKRD36BP1Q96IX9 119 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 SLC2A4RGQ9NR83 387 aa10.36□□□□□ -0.75
CHD7-208ENST00000528280 TIMM13Q9Y5L4 95 aaPredicted RBP10.36□□□□□ -0.75
CHD7-208ENST00000528280 CHD6Q8TD26 2715 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 VWA8A3KMH1 1905 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 DNAH14Q0VDD8 3507 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 ECI2O75521 394 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 SEC24AO95486 1093 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 TNNC2P02585 160 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 FAM163BP0C2L3 166 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 TMEM191BP0C7N4 346 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 RFX1P22670 979 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 GUCY2FP51841 1108 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 NTHL1P78549 312 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 TWF1Q12792 350 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 CENPPQ6IPU0 288 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 PHLDB3Q6NSJ2 640 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 ADSSL1Q8N142 457 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 SPPL2BQ8TCT7 592 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 LEO1Q8WVC0 666 aaPredicted RBP10.35□□□□□ -0.75
CHD7-208ENST00000528280 RSAD2Q8WXG1 361 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 SAAL1Q96ER3 474 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 CNTNAP3BQ96NU0 1288 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 CORO1BQ9BR76 489 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 CBWD1Q9BRT8 395 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 CNTNAP3Q9BZ76 1288 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 PCIF1Q9H4Z3 704 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms