RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 ERCC5P28715 1186 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 CA8P35219 290 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 FKBP3Q00688 224 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 MYBPC2Q14324 1141 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 TPD52L1Q16890 204 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 ALKAL1Q6UXT8 129 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 FAM186BQ8IYM0 893 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 PPP1R10Q96QC0 940 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 MRPL9Q9BYD2 267 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 ZBP1Q9H171 429 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 KIAA1586Q9HCI6 787 aa12.49□□□□□ -0.41
CCDC90B-210ENST00000528149 SMIM28A0A1B0GU29 152 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 SLC16A3O15427 465 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 EFEMP2O95967 443 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 THP07101 528 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 TRIM49P0CI25 452 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 TRIM49CP0CI26 452 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 DLATP10515 647 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 BRCC3P46736 316 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 CDR1P51861 262 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 UBE3AQ05086 875 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 TMEM132DQ14C87 1099 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 PSMD6Q15008 389 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 HSP90AA4PQ58FG1 418 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 XKR4Q5GH76 650 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 FOXR2Q6PJQ5 311 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 VPS52Q8N1B4 723 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 TDRD5Q8NAT2 981 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 TMEM174Q8WUU8 243 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 RIN2Q8WYP3 895 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 CCDC127Q96BQ5 260 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 CEP63Q96MT8 703 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 SRRTQ9BXP5 876 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 PLEKHA5Q9HAU0 1116 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 ENTPD7Q9NQZ7 604 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 LIMD1Q9UGP4 676 aa12.48□□□□□ -0.41
CCDC90B-210ENST00000528149 C2orf71A6NGG8 1288 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 ADAM12O43184 909 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 WEE2P0C1S8 567 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 KCNE1P15382 129 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 HOXB8P17481 243 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 RPL17P18621 184 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 PSMC2P35998 433 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 CLCNKBP51801 687 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 ATXN1P54253 815 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 TFAMQ00059 246 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 PLCB3Q01970 1234 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 HSP90AA2PQ14568 343 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 CCDC40Q4G0X9 1142 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 RTP2Q5QGT7 225 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 PRSS55Q6UWB4 352 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 GLYCTKQ8IVS8 523 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 RNF168Q8IYW5 571 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 TMEM169Q96HH4 297 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 CNOT6LQ96LI5 555 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 NECTIN4Q96NY8 510 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 FAM193BQ96PV7 902 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 FNBP1Q96RU3 617 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 CGRRF1Q99675 332 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 RTP3Q9BQQ7 232 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 MKNK1Q9BUB5 465 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 MTMR12Q9C0I1 747 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
CCDC90B-210ENST00000528149 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 MAPK13O15264 365 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 KRT13P13646 458 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 EPCAMP16422 314 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 ALDH7A1P49419 539 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 ZNF165P49910 485 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 DLG4P78352 724 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 POU5F1Q01860 360 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 MYL5Q02045 173 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 BFSP1Q12934 665 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 TUSC3Q13454 348 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 DCAF17Q5H9S7 520 aaPredicted RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 CT47A1Q5JQC4 288 aaPredicted RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 TCERG1LQ5VWI1 586 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 SPATA1Q5VX52 437 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 LRSAM1Q6UWE0 723 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 TMC7Q7Z402 723 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 CD302Q8IX05 232 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 DHX40Q8IX18 779 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 ZDHHC14Q8IZN3 488 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 SIX5Q8N196 739 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 C12orf76Q8N812 135 aaPredicted RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 OR5B17Q8NGF7 314 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 ENOX1Q8TC92 643 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 PARD3BQ8TEW8 1205 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 BORCS6Q96GS4 357 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 NAT10Q9H0A0 1025 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 ADAM7Q9H2U9 754 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 TSPY26PQ9H489 355 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 ASB7Q9H672 318 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms