RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 MYO15AQ9UKN7 3530 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 TRIP11Q15643 1979 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 KANSL1LA0AUZ9 987 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 SPTLC2O15270 562 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 GCNT3O95395 438 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 YEATS4O95619 227 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 IDEP14735 1019 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 CEBPBP17676 345 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 PNPLA4P41247 253 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 TUFMP49411 452 aaKnown RBP15.35■□□□□ 0.05
CAPN1-212ENST00000527887 TAF6P49848 677 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 GUCY2FP51841 1108 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 AMPD3Q01432 767 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 DUSP4Q13115 394 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 SNW1Q13573 536 aaKnown RBP15.35■□□□□ 0.05
CAPN1-212ENST00000527887 CENPPQ6IPU0 288 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 CRELD2Q6UXH1 353 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-212ENST00000527887 CCDC65Q8IXS2 484 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 THEM5Q8N1Q8 247 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 C2orf15Q8WU43 125 aaKnown RBP15.35■□□□□ 0.05
CAPN1-212ENST00000527887 CACTINQ8WUQ7 758 aaKnown RBP15.35■□□□□ 0.05
CAPN1-212ENST00000527887 DNASE1L2Q92874 299 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 ASB16Q96NS5 453 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 KXD1Q9BQD3 176 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 TNMDQ9H2S6 317 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 TRPV5Q9NQA5 729 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 PANK4Q9NVE7 773 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 DPP3Q9NY33 737 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 DLGAP2Q9P1A6 1054 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 CEP72Q9P209 647 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 YIPF1Q9Y548 306 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 MYH11P35749 1972 aa15.35■□□□□ 0.05
CAPN1-212ENST00000527887 NCAM2O15394 837 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 SV2CQ496J9 727 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 TANGO2Q6ICL3 276 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 ITIH5Q86UX2 942 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 SYCP3Q8IZU3 236 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 DEPDC1BQ8WUY9 529 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 SMARCD2Q92925 531 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 NKD2Q969F2 451 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-212ENST00000527887 TCEAL4Q96EI5 215 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 ZNF560Q96MR9 790 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 BCO2Q9BYV7 579 aa15.34■□□□□ 0.05
CAPN1-212ENST00000527887 CIZ1Q9ULV3 898 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-212ENST00000527887 MRPS17Q9Y2R5 130 aaKnown RBP15.34■□□□□ 0.05
CAPN1-212ENST00000527887 MTMR11A4FU01 709 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 TISP43B9A030 160 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 CYB561D2O14569 222 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 PPEF2O14830 753 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 SPTLC1O15269 473 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 DCNP07585 359 aaKnown RBP15.33■□□□□ 0.04
CAPN1-212ENST00000527887 GLULP15104 373 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 CCR2P41597 374 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 FAM78AQ5JUQ0 283 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 ATL3Q6DD88 541 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 ZNF852Q6ZMS4 543 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 C1orf210Q8IVY1 113 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 BRSK2Q8IWQ3 736 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 HS6ST3Q8IZP7 471 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 IQUBQ8NA54 791 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 ST13P5Q8NFI4 369 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-212ENST00000527887 IRF7Q92985 503 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 PSMG2Q969U7 264 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 PGLYRP2Q96PD5 576 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 FAM213AQ9BRX8 229 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 TRMT61BQ9BVS5 477 aaKnown RBP15.33■□□□□ 0.04
CAPN1-212ENST00000527887 PANK2Q9BZ23 570 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 KBTBD4Q9NVX7 518 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 WDR87Q6ZQQ6 2873 aa15.33■□□□□ 0.04
CAPN1-212ENST00000527887 VPS13AQ96RL7 3174 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 PRR23AA6NEV1 266 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 FAM170BA6NMN3 283 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 KPNA7A9QM74 516 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 MAN2B1O00754 1011 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 EXTL3O43909 919 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 CUTAO60888 179 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 MOSPD3O75425 235 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 VNN2O95498 520 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 OR4Q2P0C623 313 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 MYL4P12829 197 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 PSMC3P17980 439 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 FCARP24071 287 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 MLLT6P55198 1093 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-212ENST00000527887 KCNA1Q09470 495 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 CNNM4Q6P4Q7 775 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 ZC3H14Q6PJT7 736 aaKnown RBP15.32■□□□□ 0.04
CAPN1-212ENST00000527887 EFCAB13Q8IY85 973 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 DCP1BQ8IZD4 617 aaKnown RBP15.32■□□□□ 0.04
CAPN1-212ENST00000527887 ATAD1Q8NBU5 361 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 SPATA18Q8TC71 538 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 SPPL2BQ8TCT7 592 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 PYM1Q9BRP8 204 aaKnown RBP15.32■□□□□ 0.04
CAPN1-212ENST00000527887 LRRC3Q9BY71 257 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 PLA2G2FQ9BZM2 168 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 ZCWPW1Q9H0M4 648 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 BRD9Q9H8M2 597 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 MAGEF1Q9HAY2 307 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 RBAKQ9NYW8 714 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-212ENST00000527887 TBC1D7Q9P0N9 293 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms