RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	UIMC1	Q96RL1	719 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NAP1L3	Q99457	506 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.08	□□□□□ -1.76	4e-13	■■□□□ 11.5
CLNS1A-209	ENST00000527299	SLC39A3	Q9BRY0	314 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TANGO6	Q9C0B7	1094 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	RABEP2	Q9H5N1	569 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	IFT122	Q9HBG6	1241 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CYP4F11	Q9HBI6	524 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ARFGAP3	Q9NP61	516 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZCCHC17	Q9NP64	241 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	KLC4	Q9NSK0	619 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	DKK3	Q9UBP4	350 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SEL1L	Q9UBV2	794 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZMAT5	Q9UDW3	170 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	DDX20	Q9UHI6	824 aa	Known RBP	4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TMCO1	Q9UM00	188 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	B3GALT1	Q9Y5Z6	326 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	IKBKG	Q9Y6K9	419 aa		4.08	□□□□□ -1.76
CLNS1A-209	ENST00000527299	KAT6B	Q8WYB5	2073 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	HECW1	Q76N89	1606 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TCOF1	Q13428	1488 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	HFM1	A2PYH4	1435 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PIK3R4	Q99570	1358 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TTC41P	Q6P2S7	1318 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZNF644	Q9H582	1327 aa	Predicted RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TARSL2	A2RTX5	802 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CCDC151	A5D8V7	595 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	GOLGA6L4	A6NEF3	574 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TBKBP1	A7MCY6	615 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	FAM25E	A8MYX2	175 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299		B4DLN1	442 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	BOLA2-SMG1P6	H3BVE0	249 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NPHP1	O15259	732 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TTI1	O43156	1089 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SHOX2	O60902	331 aa	Predicted RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	RAB11FIP3	O75154	756 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CAVIN2	O95810	425 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	C6orf222	P0C671	652 aa	Predicted RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CCDC166	P0CW27	439 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TROVE2	P10155	538 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SYT1	P21579	422 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CA8	P35219	290 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	DNM2	P50570	870 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SCNN1B	P51168	640 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ANTXR2	P58335	489 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ARPC4	P59998	168 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CTAG1A	P78358	180 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	IFFO1	Q0D2I5	559 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ARHGEF6	Q15052	776 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SNCB	Q16143	134 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PABPC1L	Q4VXU2	614 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TIGD2	Q4W5G0	525 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	EPHA10	Q5JZY3	1008 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SPDYC	Q5MJ68	293 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	EMC10	Q5UCC4	262 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	VPS53	Q5VIR6	699 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CREB3L3	Q68CJ9	461 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZSCAN25	Q6NSZ9	544 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	DZIP1	Q86YF9	867 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CEP57L1	Q8IYX8	460 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SLC43A3	Q8NBI5	491 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TEKT4	Q8WW24	435 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	UBXN4	Q92575	508 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	MPP4	Q96JB8	637 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	IWS1	Q96ST2	819 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TSC22D3	Q99576	134 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PAGR1	Q9BTK6	254 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	VCX3B	Q9H321	246 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	COMMD8	Q9NX08	183 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	MKS1	Q9NXB0	559 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TRMT1	Q9NXH9	659 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	UBAP1	Q9NZ09	502 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CIDEB	Q9UHD4	219 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	DNAI1	Q9UI46	699 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	MAGEL2	Q9UJ55	1249 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PAIP2B	Q9ULR5	123 aa	Known RBP	4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SPO11	Q9Y5K1	396 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CAPN7	Q9Y6W3	813 aa		4.07	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SYNM	O15061	1565 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CAMSAP2	Q08AD1	1489 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	NAIP	Q13075	1403 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ANKRD50	Q9ULJ7	1429 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	CENPVL1	A0A0U1RR11	272 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299		A6NNZ2	444 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TRIM24	O15164	1050 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	ZSCAN12	O43309	604 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	MGRN1	O60291	552 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	SKAP2	O75563	359 aa	Predicted RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	STAM2	O75886	525 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TMCC1	O94876	653 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	LUC7L3	O95232	432 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	PARP1	P09874	1014 aa	Known RBP	4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TSPY4	P0CV99	314 aa		4.06	□□□□□ -1.76
CLNS1A-209	ENST00000527299	TSPY10	P0CW01	314 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms