RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 DMAC2Q9NW81 257 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 C2CD4DB7Z1M9 353 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 PI4K2BG5E9Z4 385 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 TULP1O00294 542 aaPredicted RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 SYN3O14994 580 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 HCRTO43612 131 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 TRAPPC3O43617 180 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 ZMYND10O75800 440 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 IL18RAPO95256 599 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 LDHAP00338 332 aaKnown RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 C1RP00736 705 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 MYL1P05976 194 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 SRGAP2BP0DMP2 458 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 ARPP19P56211 112 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 NTHL1P78549 312 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 TFAMQ00059 246 aaKnown RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 PSMD2Q13200 908 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 SNRNP35Q16560 246 aaKnown RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 ATAT1Q5SQI0 421 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 RNF19BQ6ZMZ0 732 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 ANKS3Q6ZW76 656 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 C12orf56Q8IXR9 622 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 ELOA2Q8IYF1 753 aaPredicted RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 ST13P5Q8NFI4 369 aaPredicted RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 BEST2Q8NFU1 509 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 CMASQ8NFW8 434 aaPredicted RBP9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 OR10T2Q8NGX3 314 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 SPATA20Q8TB22 786 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 GPT2Q8TD30 523 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 ELMO3Q96BJ8 720 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 SENP8Q96LD8 212 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 MFSD14AQ96MC6 490 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 MTMR12Q9C0I1 747 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 SMOC2Q9H3U7 446 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 EXOC1Q9NV70 894 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 INTS13Q9NVM9 706 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 HCFC1R1Q9NWW0 138 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 MUTYHQ9UIF7 546 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 DOCK8Q8NF50 2099 aa9.58□□□□□ -0.88
CCDC90B-208ENST00000527025 UBE4BO95155 1302 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 ZNF233A6NK53 670 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 ITGB3P05106 788 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 C8AP07357 584 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 BMP6P22004 513 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 POLR2BP30876 1174 aaKnown RBP9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 DLG4P78352 724 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 CYP24A1Q07973 514 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 KCNB1Q14721 858 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 CCDC142Q17RM4 750 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 CTXN3Q4LDR2 81 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 ZCWPW2Q504Y3 356 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 C1orf220Q5T0J3 134 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 CES5AQ6NT32 575 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 DSTYKQ6XUX3 929 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 C15orf39Q6ZRI6 1047 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 STXBP4Q6ZWJ1 553 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 LRRTM3Q86VH5 581 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 CSGALNACT2Q8N6G5 542 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 XXYLT1Q8NBI6 393 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 ZNF461Q8TAF7 563 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 SLC7A14Q8TBB6 771 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 HDAC7Q8WUI4 952 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 TMEM174Q8WUU8 243 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 CCDC127Q96BQ5 260 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 PRKD2Q9BZL6 878 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 PLEKHA4Q9H4M7 779 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 AGAP1Q9UPQ3 857 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 FAM50BQ9Y247 325 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 NME7Q9Y5B8 376 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 PCDHA5Q9Y5H7 936 aa9.57□□□□□ -0.88
CCDC90B-208ENST00000527025 KPNA7A9QM74 516 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 PDXKO00764 312 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 CYB561D2O14569 222 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 CCL16O15467 120 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 XPOTO43592 962 aaKnown RBP9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 KINO60870 393 aaKnown RBP9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 NR3C1P04150 777 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 CYP11A1P05108 521 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 ATF2P15336 505 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 MTHFRP42898 656 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 TAF6P49848 677 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 PMS1P54277 932 aaKnown RBP9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 SNRPFP62306 86 aaKnown RBP9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 CREMQ03060 361 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 YWHAHQ04917 246 aaPredicted RBP9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 PSMD6Q15008 389 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 WSCD1Q658N2 575 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 ISM2Q6H9L7 571 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 PDXDC1Q6P996 788 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 TRAPPC11Q7Z392 1133 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 LIMS2Q7Z4I7 341 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 GRASPQ7Z6J2 395 aaPredicted RBP9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 OSTM1Q86WC4 334 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 NT5DC4Q86YG4 428 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 SLC9A9Q8IVB4 645 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 TTC9BQ8N6N2 239 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 APPL2Q8NEU8 664 aa9.56□□□□□ -0.88
CCDC90B-208ENST00000527025 SMG7Q92540 1137 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms