RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	NUP62CL	Q9H1M0	184 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SMOC2	Q9H3U7	446 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RLIM	Q9NVW2	624 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CTTNBP2NL	Q9P2B4	639 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CFAP97	Q9P2B7	532 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SRRD	Q9UH36	339 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CDYL	Q9Y232	598 aa		5.66	□□□□□ -1.5
CTNNA1-238	ENST00000523298	RHPN2P1	A8MT19	583 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KRTAP9-7	A8MTY7	169 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	DCLK1	O15075	740 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MGEA5	O60502	916 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FOXD2	O60548	495 aa	Predicted RBP	5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FAM20B	O75063	409 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	VPS4B	O75351	444 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	GNAI3	P08754	354 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	IL1R1	P14778	569 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CHRM3	P20309	590 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	FGFR4	P22455	802 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SLC11A2	P49281	568 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	UCP3	P55916	312 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	GNAI1	P63096	354 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PLP2	Q04941	152 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	TCF15	Q12870	199 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	ATP2B3	Q16720	1220 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SRL	Q86TD4	932 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	PALM2	Q8IXS6	379 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	EXTL1	Q92935	676 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KLC2	Q9H0B6	622 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	KIAA1586	Q9HCI6	787 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SACM1L	Q9NTJ5	587 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	GNL3L	Q9NVN8	582 aa	Known RBP	5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	CEP72	Q9P209	647 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	SORCS3	Q9UPU3	1222 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298	MAP3K2	Q9Y2U5	619 aa		5.65	□□□□□ -1.5
CTNNA1-238	ENST00000523298		A0A087WWL8	130 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	TRIM43B	A6NCK2	446 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	ISM1	B1AKI9	464 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	PIM1	P11309	404 aa	Predicted RBP	5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	KCNJ5	P48544	419 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	AK2	P54819	239 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	CTSW	P56202	376 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	HSD11B2	P80365	405 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SPDYA	Q5MJ70	313 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	TMPRSS9	Q7Z410	1059 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SPICE1	Q8N0Z3	855 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	FAM46D	Q8NEK8	389 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	NUP133	Q8WUM0	1156 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	GJA10	Q969M2	543 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	NACC2	Q96BF6	587 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SGCZ	Q96LD1	299 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	RIPOR3	Q96MK2	946 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	ELAC2	Q9BQ52	826 aa	Known RBP	5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	ZNF287	Q9HBT7	754 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298	DAAM1	Q9Y4D1	1078 aa		5.64	□□□□□ -1.51
CTNNA1-238	ENST00000523298		A0A1B0GTW7	788 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	POM121B	A6NF01	834 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	MARCH11	A6NNE9	402 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	RASA4B	C9J798	803 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298		K7ESM1	405 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	RASA4	O43374	803 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SUN1	O94901	812 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	GRP	P07492	148 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	IFIT2	P09913	472 aa	Known RBP	5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	TNFSF4	P23510	183 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	ACRV1	P26436	265 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	MGAT1	P26572	445 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	HTR3A	P46098	478 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SELENOP	P49908	381 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	ZNF134	P52741	427 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	HHEX	Q03014	270 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SLC13A2	Q13183	592 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	DCAF12L1	Q5VU92	463 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	ZDHHC24	Q6UX98	284 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	GDF7	Q7Z4P5	450 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	TMPRSS6	Q8IU80	811 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SLC15A4	Q8N697	577 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SAMD3	Q8N6K7	520 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	DNAJC5G	Q8N7S2	189 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	OR6B3	Q8NGW1	331 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	CPT1C	Q8TCG5	803 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	KIAA1191	Q96A73	305 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	NMD3	Q96D46	503 aa	Known RBP	5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	FAM89A	Q96GI7	184 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	MSLNL	Q96KJ4	702 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	ADAM2	Q99965	735 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	DEF6	Q9H4E7	631 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SMPD4	Q9NXE4	827 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	TRPM5	Q9NZQ8	1165 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	EIF2B4	Q9UI10	523 aa	Known RBP	5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	OGDHL	Q9ULD0	1010 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	CLCA2	Q9UQC9	943 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SNX13	Q9Y5W8	968 aa		5.63	□□□□□ -1.51
CTNNA1-238	ENST00000523298	GOLGA6L6	A8MZA4	724 aa		5.62	□□□□□ -1.51
CTNNA1-238	ENST00000523298	RPS6KA4	O75676	772 aa		5.62	□□□□□ -1.51
CTNNA1-238	ENST00000523298	NCR1	O76036	304 aa		5.62	□□□□□ -1.51
CTNNA1-238	ENST00000523298	SCAF4	O95104	1147 aa	Known RBP	5.62	□□□□□ -1.51
CTNNA1-238	ENST00000523298	ANXA1	P04083	346 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms