RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CWF19L1Q69YN2 538 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 MFN1Q8IWA4 741 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 OLIG1Q8TAK6 271 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 C7orf43Q8WVR3 580 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 BTBD10Q9BSF8 475 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 DDTLA6NHG4 134 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 INHBAP08476 426 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 IL1R1P14778 569 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 ACADSP16219 412 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 SLC1A1P43005 524 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 TAS2R40P59535 323 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 TFDP1Q14186 410 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 EFTUD2Q15029 972 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 CLEC16AQ2KHT3 1053 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 ZNF394Q53GI3 561 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 SLC45A4Q5BKX6 768 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 MCOLN2Q8IZK6 566 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 GLIS1Q8NBF1 620 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 SHC3Q92529 594 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 FAM81BQ96LP2 452 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 FAM111AQ96PZ2 611 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 THTPAQ9BU02 230 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 CADM1Q9BY67 442 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 MRPL47Q9HD33 250 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 UBE4BO95155 1302 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 DENND3A2RUS2 1198 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 P4HA2O15460 535 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 TJP3O95049 919 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 IVDP26440 423 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 SLC34A1Q06495 639 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 NFX1Q12986 1120 aaKnown RBP13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 LRRC23Q53EV4 343 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 C1orf146Q5VVC0 180 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 MBOAT7Q96N66 472 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 IWS1Q96ST2 819 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 MAK16Q9BXY0 300 aaKnown RBP13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 PCDHAC2Q9Y5I4 1007 aa13.52□□□□□ -0.24
TRAPPC9-208ENST00000520857 PSMC4P43686 418 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 PLA2G4FQ68DD2 849 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 ZCCHC9Q8N567 271 aaKnown RBP13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 C10orf82Q8WW14 230 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 TRIM11Q96F44 468 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 TMEM120AQ9BXJ8 343 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 SMYD3Q9H7B4 428 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 SYNCQ9H7C4 482 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 KMT5AQ9NQR1 393 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 NYAP2Q9P242 653 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 ANGPTL2Q9UKU9 493 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 T-ENOLP0DO92 83 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 DMP1Q13316 513 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 SLC15A2Q16348 729 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 MAPK6Q16659 721 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 ACSBG2Q5FVE4 666 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 SMC1BQ8NDV3 1235 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 ZWILCHQ9H900 591 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 ITGB4P16144 1822 aa13.52□□□□□ -0.25
TRAPPC9-208ENST00000520857 SPATA31A1Q5TZJ5 1347 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 PSMD10O75832 226 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 PROSCO94903 275 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 PSMG1O95456 288 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 SERPINB2P05120 415 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 MYL2P10916 166 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 CRKP46108 304 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 TRAF1Q13077 416 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 SPOPLQ6IQ16 392 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 SV2AQ7L0J3 742 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 OGFOD1Q8N543 542 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 CCDC110Q8TBZ0 833 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 TUBB6Q9BUF5 446 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 SLC17A7Q9P2U7 560 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 SAE1Q9UBE0 346 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 G3BP2Q9UN86 482 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 MAGEA13PA6NCF6 341 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 DNALI1O14645 258 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 CIITAP33076 1130 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 RAB27AP51159 221 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 GEMIN4P57678 1058 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 TMPRSS15P98073 1019 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 IZUMO2Q6UXV1 221 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 ZNF333Q96JL9 665 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 PAFAH2Q99487 392 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 NDE1Q9NXR1 346 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 CHMP2BQ9UQN3 213 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 USP20Q9Y2K6 914 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 WASF2Q9Y6W5 498 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 DLEC1Q9Y238 1755 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 BGNP21810 368 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 ARL4CP56559 192 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 FAM182AQ5T1J6 154 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 TTC7BQ86TV6 843 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 ATP11CQ8NB49 1132 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 CCDC124Q96CT7 223 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 MYH11P35749 1972 aa13.51□□□□□ -0.25
TRAPPC9-208ENST00000520857 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms