RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 AREL1O15033 823 aa8.79□□□□□ -1
LSM1-202ENST00000520286 HSD3B1P14060 373 aa8.79□□□□□ -1
LSM1-202ENST00000520286 IL1R1P14778 569 aa8.79□□□□□ -1
LSM1-202ENST00000520286 ZNF135P52742 658 aaPredicted RBP8.79□□□□□ -1
LSM1-202ENST00000520286 UCP3P55916 312 aa8.79□□□□□ -1
LSM1-202ENST00000520286 GALNT1Q10472 559 aaPredicted RBP8.79□□□□□ -1
LSM1-202ENST00000520286 PFKFB4Q16877 469 aa8.79□□□□□ -1
LSM1-202ENST00000520286 FAM214AQ32MH5 1076 aa8.79□□□□□ -1
LSM1-202ENST00000520286 CRB2Q5IJ48 1285 aa8.79□□□□□ -1
LSM1-202ENST00000520286 UTP14CQ5TAP6 766 aaKnown RBP8.79□□□□□ -1
LSM1-202ENST00000520286 RRAGBQ5VZM2 374 aa8.79□□□□□ -1
LSM1-202ENST00000520286 CCDC70Q6NSX1 233 aa8.79□□□□□ -1
LSM1-202ENST00000520286 ATG14Q6ZNE5 492 aa8.79□□□□□ -1
LSM1-202ENST00000520286 USP37Q86T82 979 aa8.79□□□□□ -1
LSM1-202ENST00000520286 ZNF761Q86XN6 746 aaPredicted RBP8.79□□□□□ -1
LSM1-202ENST00000520286 XYLT1Q86Y38 959 aa8.79□□□□□ -1
LSM1-202ENST00000520286 CACNA2D3Q8IZS8 1091 aa8.79□□□□□ -1
LSM1-202ENST00000520286 SDR16C5Q8N3Y7 309 aa8.79□□□□□ -1
LSM1-202ENST00000520286 ATG16L2Q8NAA4 619 aa8.79□□□□□ -1
LSM1-202ENST00000520286 SHCBP1Q8NEM2 672 aa8.79□□□□□ -1
LSM1-202ENST00000520286 RMDN3Q96TC7 470 aa8.79□□□□□ -1
LSM1-202ENST00000520286 TBC1D23Q9NUY8 699 aa8.79□□□□□ -1
LSM1-202ENST00000520286 FBXO34Q9NWN3 711 aa8.79□□□□□ -1
LSM1-202ENST00000520286 SAGE1Q9NXZ1 904 aa8.79□□□□□ -1
LSM1-202ENST00000520286 C9orf78Q9NZ63 289 aaPredicted RBP8.79□□□□□ -1
LSM1-202ENST00000520286 ZNF212Q9UDV6 495 aa8.79□□□□□ -1
LSM1-202ENST00000520286 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.79□□□□□ -1
LSM1-202ENST00000520286 TCAF2A6NFQ2 919 aa8.78□□□□□ -1
LSM1-202ENST00000520286 MROH6A6NGR9 719 aa8.78□□□□□ -1
LSM1-202ENST00000520286 TBKBP1A7MCY6 615 aa8.78□□□□□ -1
LSM1-202ENST00000520286 MYO1CO00159 1063 aa8.78□□□□□ -1
LSM1-202ENST00000520286 MATN2O00339 956 aa8.78□□□□□ -1
LSM1-202ENST00000520286 MYL4P12829 197 aa8.78□□□□□ -1
LSM1-202ENST00000520286 UBXN2BQ14CS0 331 aa8.78□□□□□ -1
LSM1-202ENST00000520286 BMT2Q1RMZ1 405 aa8.78□□□□□ -1
LSM1-202ENST00000520286 ZNF385BQ569K4 471 aa8.78□□□□□ -1
LSM1-202ENST00000520286 DCAF12L1Q5VU92 463 aa8.78□□□□□ -1
LSM1-202ENST00000520286 FBXO38Q6PIJ6 1188 aa8.78□□□□□ -1
LSM1-202ENST00000520286 IPCEF1Q8WWN9 437 aaPredicted RBP8.78□□□□□ -1
LSM1-202ENST00000520286 SCAMP4Q969E2 229 aa8.78□□□□□ -1
LSM1-202ENST00000520286 DACT3Q96B18 629 aaPredicted RBP8.78□□□□□ -1
LSM1-202ENST00000520286 TBC1D20Q96BZ9 403 aa8.78□□□□□ -1
LSM1-202ENST00000520286 LRRC46Q96FV0 321 aa8.78□□□□□ -1
LSM1-202ENST00000520286 BORCS6Q96GS4 357 aa8.78□□□□□ -1
LSM1-202ENST00000520286 TINAGL1Q9GZM7 467 aaPredicted RBP8.78□□□□□ -1
LSM1-202ENST00000520286 C12orf65Q9H3J6 166 aaKnown RBP8.78□□□□□ -1
LSM1-202ENST00000520286 OBP2BQ9NPH6 170 aa8.78□□□□□ -1
LSM1-202ENST00000520286 TM7SF3Q9NS93 570 aa8.78□□□□□ -1
LSM1-202ENST00000520286 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
LSM1-202ENST00000520286 LRFN1Q9P244 771 aa8.78□□□□□ -1
LSM1-202ENST00000520286 TMX2Q9Y320 296 aa8.78□□□□□ -1
LSM1-202ENST00000520286 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
LSM1-202ENST00000520286 B4GALT4O60513 344 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 RASSF9O75901 435 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 AGFG2O95081 481 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 TXNP10599 105 aaKnown RBP8.77□□□□□ -1.01
LSM1-202ENST00000520286 RAC3P60763 192 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 PPFIA1Q13136 1202 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 CYP2W1Q8TAV3 490 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 TRAPPC12Q8WVT3 735 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 GCC1Q96CN9 775 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 PAGR1Q9BTK6 254 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 AGO3Q9H9G7 860 aaKnown RBP8.77□□□□□ -1.01
LSM1-202ENST00000520286 DACT1Q9NYF0 836 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 GRHPRQ9UBQ7 328 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 AGAP1Q9UPQ3 857 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 PEG3Q9GZU2 1588 aa8.77□□□□□ -1.01
LSM1-202ENST00000520286 KIF21AQ7Z4S6 1674 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 CDHR4A6H8M9 788 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 LGALS16A8MUM7 142 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 HMGB1P1B2RPK0 211 aaPredicted RBP8.76□□□□□ -1.01
LSM1-202ENST00000520286 M0QYG6 137 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 M0R3H8 397 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 PODXLO00592 558 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 NPC1O15118 1278 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 MESP2Q0VG99 397 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 AMOTQ4VCS5 1084 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 ATXN7L2Q5T6C5 722 aaPredicted RBP8.76□□□□□ -1.01
LSM1-202ENST00000520286 VGLL2Q8N8G2 317 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 TMIEQ8NEW7 156 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 GDF15Q99988 308 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 TMEM120AQ9BXJ8 343 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 MAGEB5Q9BZ81 275 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 MAGEH1Q9H213 219 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 XPR1Q9UBH6 696 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 HDAC9Q9UKV0 1011 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 SMG5Q9UPR3 1016 aaKnown RBP8.76□□□□□ -1.01
LSM1-202ENST00000520286 HDAC5Q9UQL6 1122 aa8.76□□□□□ -1.01
LSM1-202ENST00000520286 FAM234BA2RU67 622 aa8.75□□□□□ -1.01
LSM1-202ENST00000520286 NDST3O95803 873 aa8.75□□□□□ -1.01
LSM1-202ENST00000520286 CHEK2O96017 543 aa8.75□□□□□ -1.01
LSM1-202ENST00000520286 PIM1P11309 404 aaPredicted RBP8.75□□□□□ -1.01
LSM1-202ENST00000520286 TAL1P17542 331 aaPredicted RBP8.75□□□□□ -1.01
LSM1-202ENST00000520286 IL1R2P27930 398 aa8.75□□□□□ -1.01
LSM1-202ENST00000520286 AFF3P51826 1226 aaKnown RBP8.75□□□□□ -1.01
LSM1-202ENST00000520286 FAM111BQ6SJ93 734 aa8.75□□□□□ -1.01
LSM1-202ENST00000520286 MMS22LQ6ZRQ5 1243 aa8.75□□□□□ -1.01
LSM1-202ENST00000520286 FAM124AQ86V42 546 aa8.75□□□□□ -1.01
LSM1-202ENST00000520286 YAF2Q8IY57 180 aa8.75□□□□□ -1.01
LSM1-202ENST00000520286 FITM2Q8N6M3 262 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms