RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PPP4R4Q6NUP7 873 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 DARS2Q6PI48 645 aaKnown RBP4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 MAPKAPK5Q8IW41 473 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF276Q8N554 614 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 LENG9Q96B70 501 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 MYEOVQ96EZ4 313 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF503Q96F45 646 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 MARS2Q96GW9 593 aaKnown RBP4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 KLHL32Q96NJ5 620 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 AKIP1Q9NQ31 210 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 DDX21Q9NR30 783 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 RNF181Q9P0P0 153 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 RSF1Q96T23 1441 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 GOLIM4O00461 696 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 TPP1O14773 563 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF202O95125 648 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 GPANK1O95872 356 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 AHSGP02765 367 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 THP07101 528 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 C1SP09871 688 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 ITGB6P18564 788 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 RHCEP18577 417 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 LAG3P18627 525 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 FGFR4P22455 802 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 MCM7P33993 719 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 PTGS2P35354 604 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 SOX8P57073 446 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 PSMC1P62191 440 aaKnown RBP4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 POU6F2P78424 691 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 RHDQ02161 417 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF844Q08AG5 666 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 TCF15Q12870 199 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 HABP2Q14520 560 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 LLGL1Q15334 1064 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 CNN3Q15417 329 aaKnown RBP4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 BEAN1Q3B7T3 259 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 RNF220Q5VTB9 566 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 CCSAPQ6IQ19 270 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 CCDC149Q6ZUS6 474 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 FAM9AQ8IZU1 332 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 SYNE4Q8N205 404 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 TMEM132CQ8N3T6 1108 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLC17A8Q8NDX2 589 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 TMIEQ8NEW7 156 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 KBTBD7Q8WVZ9 684 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 SUCLG2Q96I99 432 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 BOD1Q96IK1 185 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 IMPG2Q9BZV3 1241 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLAMF7Q9NQ25 335 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 CPA4Q9UI42 421 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 KCNE5Q9UJ90 142 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLC45A2Q9UMX9 530 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 PCDHA6Q9UN73 950 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 FZD1Q9UP38 647 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 MED16Q9Y2X0 877 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 PAXBP1Q9Y5B6 917 aa4.12□□□□□ -1.75
HMGB1P41-201ENST00000520234 CFAP69A5D8W1 941 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 MYADML2A6NDP7 307 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 TMEM200CA6NKL6 621 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 MARCH11A6NNE9 402 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 A6NNZ2 444 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF785A8K8V0 405 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 ISM1B1AKI9 464 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 MGEA5O60502 916 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 NCR1O76036 304 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 KRT18P05783 430 aaKnown RBP4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 FCER1AP12319 257 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 RPL17P18621 184 aaKnown RBP4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 KCNJ5P48544 419 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 PTTG1IPP53801 180 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 TBX4P57082 545 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 FAM189BP81408 668 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 OCA2Q04671 838 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 TUBA3CQ13748 450 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 KIAA0753Q2KHM9 967 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 TIGD2Q4W5G0 525 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 TUBA3EQ6PEY2 450 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 LRRC55Q6ZSA7 311 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 USP37Q86T82 979 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 GLCCI1Q86VQ1 547 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 CFAP52Q8N1V2 620 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 PDPRQ8NCN5 879 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 FAM156AQ8NDB6 213 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 LRTOMTQ8WZ04 291 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 ANKS1AQ92625 1134 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 HAS1Q92839 578 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 MRGPRX1Q96LB2 322 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 CNPPD1Q9BV87 410 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 SARGQ9BW04 601 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 LRRC27Q9C0I9 530 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZMAT3Q9HA38 289 aaKnown RBP4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 TMEM74BQ9NUR3 256 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 STAP2Q9UGK3 403 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 TPCN1Q9ULQ1 816 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 NOX1Q9Y5S8 564 aa4.11□□□□□ -1.75
HMGB1P41-201ENST00000520234 NACADO15069 1562 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 CCDC195A0A1B0GUA6 201 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 E7ENX8 843 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 ERN1O75460 977 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms