RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 LNX2Q8N448 690 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 SLC30A5Q8TAD4 765 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 LPIN2Q92539 896 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 TNPO1Q92973 898 aaKnown RBP6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 MRPL46Q9H2W6 279 aaKnown RBP6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 SLC12A5Q9H2X9 1139 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 SMOC2Q9H3U7 446 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 LMBRD1Q9NUN5 540 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 SIDT1Q9NXL6 827 aaKnown RBP6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 KCTD5Q9NXV2 234 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 POLHQ9Y253 713 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 NR2E3Q9Y5X4 410 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 CCDC195A0A1B0GUA6 201 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 NUDT3O95989 172 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 TYRP14679 529 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 CHRM3P20309 590 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 AKAP5P24588 427 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 CYP2C19P33261 490 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 HNRNPMP52272 730 aaKnown RBP eCLIP6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 ZNF135P52742 658 aaPredicted RBP6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 FPGSQ05932 587 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 DYRK1AQ13627 763 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 SP5Q6BEB4 398 aaPredicted RBP6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 CLNKQ7Z7G1 428 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 COLGALT2Q8IYK4 626 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 PLBD2Q8NHP8 589 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 JPH3Q8WXH2 748 aaPredicted RBP6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 TRIB1Q96RU8 372 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 ETAA1Q9NY74 926 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 ZNHIT2Q9UHR6 403 aa6.73□□□□□ -1.33
SCARNA1-201ENST00000517138 TOR1BO14657 336 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 SLC16A6O15403 523 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 VPS4BO75351 444 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 KIF20AO95235 890 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 CXCR5P32302 372 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 TOB1P50616 345 aaPredicted RBP6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 ANXA11P50995 505 aaKnown RBP6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 NKX6-1P78426 367 aaPredicted RBP6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 BLOC1S1P78537 153 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 PLS1Q14651 629 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 KIF22Q14807 665 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 ATAT1Q5SQI0 421 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 PDSS2Q86YH6 399 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 SCAMP4Q969E2 229 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 LRGUKQ96M69 825 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 NUP88Q99567 741 aaPredicted RBP6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 GPR35Q9HC97 309 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 FOXJ2Q9P0K8 574 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 ZNF180Q9UJW8 692 aa6.72□□□□□ -1.33
SCARNA1-201ENST00000517138 POLRMTO00411 1230 aaKnown RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 AP1G1O43747 822 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 GNAI3P08754 354 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 CT47B1P0C2W7 299 aaPredicted RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 MYBP10242 640 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 HDCP19113 662 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 RPS7P62081 194 aaKnown RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 GNAI1P63096 354 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 POU6F2P78424 691 aaPredicted RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 SIM1P81133 766 aaPredicted RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 EXOSC9Q06265 439 aaKnown RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 BOP1Q14137 746 aaKnown RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 HABP2Q14520 560 aaPredicted RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 PRR16Q569H4 304 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 IFIT1BQ5T764 474 aaKnown RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 THEMIS2Q5TEJ8 643 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 COL23A1Q86Y22 540 aaPredicted RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 DNAJC10Q8IXB1 793 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 SIMC1Q8NDZ2 872 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 POC1BQ8TC44 478 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 CGRRF1Q99675 332 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 WDCPQ9H6R7 721 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 ARMT1Q9H993 441 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 ANLNQ9NQW6 1124 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 PNPOQ9NVS9 261 aa6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 FEZ2Q9UHY8 353 aaPredicted RBP6.71□□□□□ -1.34
SCARNA1-201ENST00000517138 H3BUI4 141 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 ANXA1P04083 346 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 FTH1P19P0C7X4 201 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 RARBP10826 455 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 PPP3CBP16298 524 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 ZNF169Q14929 603 aaPredicted RBP6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 LRRC41Q15345 812 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 PLEKHG6Q3KR16 790 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 ZNF362Q5T0B9 420 aaPredicted RBP6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 TAF2Q6P1X5 1199 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 VWA1Q6PCB0 445 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 AOPEPQ8N6M6 819 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 PPP1R35Q8TAP8 253 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 DIS3LQ8TF46 1054 aaKnown RBP6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 MAP3K14Q99558 947 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 SMOQ99835 787 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 TINAGL1Q9GZM7 467 aaPredicted RBP6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 CDH19Q9H159 772 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 RIOX1Q9H6W3 641 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 INTS13Q9NVM9 706 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 ZIM2Q9NZV7 527 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 CFAP97Q9P2B7 532 aa6.7□□□□□ -1.34
SCARNA1-201ENST00000517138 ZAR1LA6NP61 321 aa6.69□□□□□ -1.34
SCARNA1-201ENST00000517138 VWC2LB2RUY7 222 aa6.69□□□□□ -1.34
SCARNA1-201ENST00000517138 YY2O15391 372 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms