RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 FGFR4P22455 802 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 ZFP36P26651 326 aaKnown RBP6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 ALDH5A1P51649 535 aaPredicted RBP6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 ADAM17P78536 824 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 OCA2Q04671 838 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 EFEMP1Q12805 493 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 TCF15Q12870 199 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 RABL3Q5HYI8 236 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 SPDYAQ5MJ70 313 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 ERICH6BQ5W0A0 696 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 GDF7Q7Z4P5 450 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 PPP1R32Q7Z5V6 425 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 CFAP52Q8N1V2 620 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 NSUN7Q8NE18 718 aaKnown RBP6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 CPT1CQ8TCG5 803 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 EXTL1Q92935 676 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 DVL3Q92997 716 aaPredicted RBP6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 PHKBQ93100 1093 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 DCLRE1CQ96SD1 692 aaKnown RBP6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 STRBPQ96SI9 672 aaKnown RBP6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 KIAA1586Q9HCI6 787 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 TRPM5Q9NZQ8 1165 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 CEP72Q9P209 647 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 SRRDQ9UH36 339 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 TESMINQ9Y4I5 508 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 A0A1B0GTW7 788 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 F8W8V4 182 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 BTN3A1O00481 513 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 KPNA5O15131 536 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 RPS6KA4O75676 772 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 GNAI2P04899 355 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 PIM1P11309 404 aaPredicted RBP6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 FDXRP22570 491 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 TM4SF4P48230 202 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 PRIM2P49643 509 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 TOB1P50616 345 aaPredicted RBP6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 HSD11B2P80365 405 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 SLC25A3Q00325 362 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 BOP1Q14137 746 aaKnown RBP6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 LONRF1Q17RB8 773 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 C3orf38Q5JPI3 329 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 ZNF783Q6ZMS7 281 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 OR6B3Q8NGW1 331 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 C1QTNF3Q9BXJ4 246 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 REXO4Q9GZR2 422 aaKnown RBP6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 ZNF287Q9HBT7 754 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 ETAA1Q9NY74 926 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 COL20A1Q9P218 1284 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 FNIP2Q9P278 1114 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 OGDHLQ9ULD0 1010 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 ATP11BQ9Y2G3 1177 aa6.37□□□□□ -1.39
HMGCS1-207ENST00000514610 RHPN2P1A8MT19 583 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 DIRC3C9JPN6 131 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 PEX14O75381 377 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 ZFPL1O95159 310 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 CHEK2O96017 543 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 GRPP07492 148 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 NR4A1P22736 598 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 CASP5P51878 434 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 CTBP1Q13363 440 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 HDAC1Q13547 482 aaPredicted RBP6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 USP39Q53GS9 565 aaKnown RBP6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 C11orf96Q7Z7L8 435 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 MICU3Q86XE3 530 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 Q8NA96 180 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 FAM46DQ8NEK8 389 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 ZNF483Q8TF39 744 aaPredicted RBP6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 PNKPQ96T60 521 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 RNPEPQ9H4A4 650 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 SACM1LQ9NTJ5 587 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 CTTNBP2NLQ9P2B4 639 aa6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.36□□□□□ -1.39
HMGCS1-207ENST00000514610 TRIM43BA6NCK2 446 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 MARCH11A6NNE9 402 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 TMEM233B4DJY2 109 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 VPS4BO75351 444 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 NCR1O76036 304 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 SERPINB3P29508 390 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 SLC11A2P49281 568 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 UCP3P55916 312 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 POU6F2P78424 691 aaPredicted RBP6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 ZNF543Q08ER8 600 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 SLC13A2Q13183 592 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 B3GNTL1Q67FW5 361 aaPredicted RBP6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 TAPT1Q6NXT6 567 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 C1orf210Q8IVY1 113 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 MAPKAPK5Q8IW41 473 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 DDX17Q92841 729 aaKnown RBP6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 TRIM43Q96BQ3 446 aaPredicted RBP6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 NMD3Q96D46 503 aaKnown RBP6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 SUCLG2Q96I99 432 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 CNPPD1Q9BV87 410 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 AFF4Q9UHB7 1163 aaKnown RBP6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 MAP3K2Q9Y2U5 619 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 TSC22D4Q9Y3Q8 395 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 PLEKHM1Q9Y4G2 1056 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 SNX13Q9Y5W8 968 aa6.35□□□□□ -1.39
HMGCS1-207ENST00000514610 A0A087WWL8 130 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms