RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 RRADP55042 308 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 DLG4P78352 724 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 POU6F2P78424 691 aaPredicted RBP6.11□□□□□ -1.43
RFC1-216ENST00000514572 CREMQ03060 361 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 LMOD3Q0VAK6 560 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 SLC44A4Q53GD3 710 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 ZMAT1Q5H9K5 638 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 DCAF12L1Q5VU92 463 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 GGT6Q6P531 493 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 MZT2AQ6P582 158 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 PPP1R32Q7Z5V6 425 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 SDR16C5Q8N3Y7 309 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 GLIS1Q8NBF1 620 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 MUL1Q969V5 352 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 MPP4Q96JB8 637 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 SLAMF7Q9NQ25 335 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 SLC45A2Q9UMX9 530 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 PLEKHM1Q9Y4G2 1056 aa6.11□□□□□ -1.43
RFC1-216ENST00000514572 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.11□□□□□ -1.43
RFC1-216ENST00000514572 TCRBV7S2A1N4TA0A589 114 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 C9orf118A6NHY6 69 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 IPO5O00410 1097 aaKnown RBP6.1□□□□□ -1.43
RFC1-216ENST00000514572 PODXLO00592 558 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 SASH1O94885 1247 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 HAUS5O94927 633 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 NDST3O95803 873 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 SNRPA1P09661 255 aaKnown RBP6.1□□□□□ -1.43
RFC1-216ENST00000514572 PIM1P11309 404 aaPredicted RBP6.1□□□□□ -1.43
RFC1-216ENST00000514572 DDIT3P35638 169 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 MAPK9P45984 424 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 PTH1RQ03431 593 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 PRKG1Q13976 671 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 RNF44Q7L0R7 432 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 KRT28Q7Z3Y7 464 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 DNAJC5GQ8N7S2 189 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 NLGN4YQ8NFZ3 816 aaPredicted RBP6.1□□□□□ -1.43
RFC1-216ENST00000514572 OR5M3Q8NGP4 307 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 OR14K1Q8NGZ2 314 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 RABGGTAQ92696 567 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 SCAMP4Q969E2 229 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 EID2BQ96D98 161 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 LTV1Q96GA3 475 aaPredicted RBP6.1□□□□□ -1.43
RFC1-216ENST00000514572 BORCS6Q96GS4 357 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 SIGLEC10Q96LC7 697 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 PPM1MQ96MI6 270 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 SORBS1Q9BX66 1292 aaKnown RBP6.1□□□□□ -1.43
RFC1-216ENST00000514572 TINAGL1Q9GZM7 467 aaPredicted RBP6.1□□□□□ -1.43
RFC1-216ENST00000514572 TMEM168Q9H0V1 697 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 IL23AQ9NPF7 189 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 RGL1Q9NZL6 768 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 CAPN11Q9UMQ6 739 aa6.1□□□□□ -1.43
RFC1-216ENST00000514572 B5MCH6 92 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 MATN2O00339 956 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 TRIM38O00635 465 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 JUNBP17275 347 aaPredicted RBP6.09□□□□□ -1.43
RFC1-216ENST00000514572 UCP3P55916 312 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 CRB2Q5IJ48 1285 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 INTS11Q5TA45 600 aaKnown RBP6.09□□□□□ -1.43
RFC1-216ENST00000514572 KRT40Q6A162 431 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 ZNF529Q6P280 563 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 GALNT15Q8N3T1 639 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 DNERQ8NFT8 737 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 IPO4Q8TEX9 1081 aaKnown RBP6.09□□□□□ -1.43
RFC1-216ENST00000514572 DDX17Q92841 729 aaKnown RBP6.09□□□□□ -1.43
RFC1-216ENST00000514572 RPL10LQ96L21 214 aaKnown RBP6.09□□□□□ -1.43
RFC1-216ENST00000514572 MAGEB5Q9BZ81 275 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 FBXO34Q9NWN3 711 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 FAM53CQ9NYF3 392 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 NTMQ9P121 344 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 LRFN1Q9P244 771 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.09□□□□□ -1.43
RFC1-216ENST00000514572 FBXO9Q9UK97 447 aaPredicted RBP6.09□□□□□ -1.43
RFC1-216ENST00000514572 AGAP1Q9UPQ3 857 aa6.09□□□□□ -1.43
RFC1-216ENST00000514572 EYA2O00167 538 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 KIAA0391O15091 583 aaKnown RBP6.08□□□□□ -1.44
RFC1-216ENST00000514572 CHEK2O96017 543 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 AMHP03971 560 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 GNAI2P04899 355 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 GRPP07492 148 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 FDXRP22570 491 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 IL1R2P27930 398 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 IRAK1P51617 712 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 COPAP53621 1224 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 PTTG1IPP53801 180 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 TBX2Q13207 712 aaPredicted RBP6.08□□□□□ -1.44
RFC1-216ENST00000514572 RNF151Q2KHN1 245 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 FAM26FQ5R3K3 315 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 ANKS6Q68DC2 871 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 TMEM132EQ6IEE7 984 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 BORAQ6PGQ7 559 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 KIAA0408Q6ZU52 694 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 GPRIN1Q7Z2K8 1008 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 UBE3BQ7Z3V4 1068 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 SLC15A4Q8N697 577 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 NAXEQ8NCW5 288 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 STYXQ8WUJ0 223 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 TRIM63Q969Q1 353 aa6.08□□□□□ -1.44
RFC1-216ENST00000514572 SPSB4Q96A44 273 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms