RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 UCP3P55916 312 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 GRAMD1BQ3KR37 738 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 UBXN11Q5T124 520 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 IZUMO3Q5VZ72 239 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 DRICH1Q6PGQ1 229 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-207ENST00000513819 USP37Q86T82 979 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 CIR1Q86X95 450 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-207ENST00000513819 MICU3Q86XE3 530 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 MPP5Q8N3R9 675 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 PDPRQ8NCN5 879 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 POF1BQ8WVV4 589 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 SCAMP4Q969E2 229 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 TRIM43Q96BQ3 446 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-207ENST00000513819 TLR10Q9BXR5 811 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 ZCCHC4Q9H5U6 513 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 GJB4Q9NTQ9 266 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 CLCA2Q9UQC9 943 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 PCDHGB2Q9Y5G2 931 aa5.3□□□□□ -1.56
NIPBL-207ENST00000513819 CAPN14A8MX76 684 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 LEFTY2O00292 366 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 ANXA1P04083 346 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 THP07101 528 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 HARSP12081 509 aaKnown RBP5.29□□□□□ -1.56
NIPBL-207ENST00000513819 MGAT1P26572 445 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 SLC11A2P49281 568 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 HTRA4P83105 476 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-207ENST00000513819 BTKQ06187 659 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 SLFN5Q08AF3 891 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 RAB32Q13637 225 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 DHX8Q14562 1220 aaKnown RBP5.29□□□□□ -1.56
NIPBL-207ENST00000513819 C1QL3Q5VWW1 255 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 SPTY2D1Q68D10 685 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-207ENST00000513819 LMBRD2Q68DH5 695 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-207ENST00000513819 ERAP2Q6P179 960 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 TSHZ1Q6ZSZ6 1077 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 POLNQ7Z5Q5 900 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 SGMS1Q86VZ5 419 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 TICAM2Q86XR7 235 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 ZFPM1Q8IX07 1006 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 ZNF808Q8N4W9 903 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-207ENST00000513819 SLC15A4Q8N697 577 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 DNAJC5GQ8N7S2 189 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 FAM46DQ8NEK8 389 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 MIEF2Q96C03 454 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 NEU1Q99519 415 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 CRB3Q9BUF7 120 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 BRIP1Q9BX63 1249 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 ZNF518BQ9C0D4 1074 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 PPCSQ9HAB8 311 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 ARFGAP3Q9NP61 516 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 TRMT13Q9NUP7 481 aaKnown RBP5.29□□□□□ -1.56
NIPBL-207ENST00000513819 PADI4Q9UM07 663 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 CDYLQ9Y232 598 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 PLEKHM1Q9Y4G2 1056 aa5.29□□□□□ -1.56
NIPBL-207ENST00000513819 VPS4BO75351 444 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 TCEA3O75764 348 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 PIM1P11309 404 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 CKBP12277 381 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 FCER1AP12319 257 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 PPM1AP35813 382 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 IL6STP40189 918 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 RABGGTBP53611 331 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 MAPK10P53779 464 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 NHLH2Q02577 135 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 HHEXQ03014 270 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 SLC44A4Q53GD3 710 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 DCAF17Q5H9S7 520 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 METTL24Q5JXM2 366 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 DGKKQ5KSL6 1271 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 DCAF12L1Q5VU92 463 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 GLB1LQ6UWU2 654 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 GSPT2Q8IYD1 628 aaKnown RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 NSUN7Q8NE18 718 aaKnown RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 OR56A3Q8NH54 315 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 DDX17Q92841 729 aaKnown RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 MARS2Q96GW9 593 aaKnown RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 SNX22Q96L94 193 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 SSBP3Q9BWW4 388 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 WDR12Q9GZL7 423 aaKnown RBP5.28□□□□□ -1.56
NIPBL-207ENST00000513819 LRCH1Q9Y2L9 728 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 TMX2Q9Y320 296 aa5.28□□□□□ -1.56
NIPBL-207ENST00000513819 A0A087WWL8 130 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 A0A1W2PPC4 97 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 PYCARD-AS1I3L0S3 204 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 MYO1CO00159 1063 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 FGF18O76093 207 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 MT-ND5P03915 603 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 IL1R1P14778 569 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 FGFR2P21802 821 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 POU6F2P78424 691 aaPredicted RBP5.27□□□□□ -1.57
NIPBL-207ENST00000513819 TRIM14Q14142 442 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 ZFYVE27Q5T4F4 411 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 TSHZ3Q63HK5 1081 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 METRNLQ641Q3 311 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 Q6ZRM9 215 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 UNC13DQ70J99 1090 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 MYLK4Q86YV6 388 aaPredicted RBP5.27□□□□□ -1.57
NIPBL-207ENST00000513819 ANKRD35Q8N283 1001 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 ATP11CQ8NB49 1132 aa5.27□□□□□ -1.57
NIPBL-207ENST00000513819 NUP133Q8WUM0 1156 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms