RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 SPDYE7PQ495Y7 208 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 SWSAP1Q6NVH7 229 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 HTR3DQ70Z44 454 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 RHOT2Q8IXI1 618 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 PCSK9Q8NBP7 692 aaKnown RBP4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 PGBD4Q96DM1 585 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZC3H10Q96K80 434 aaKnown RBP4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 MRGPRX1Q96LB2 322 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 CCDC138Q96M89 665 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 NT5C1BQ96P26 610 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 C1QTNF3Q9BXJ4 246 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 TRIM54Q9BYV2 358 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 IMPG2Q9BZV3 1241 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZNF518BQ9C0D4 1074 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 ATP6V0A4Q9HBG4 840 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 SACM1LQ9NTJ5 587 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 AFF4Q9UHB7 1163 aaKnown RBP4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 PADI4Q9UM07 663 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 PHTF1Q9UMS5 762 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 TMX2Q9Y320 296 aa4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.82□□□□□ -1.64
CALCOCO2-220ENST00000511816 XDHP47989 1333 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 BTN3A1O00481 513 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 WNT10BO00744 389 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 ERN1O75460 977 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 SOAT2O75908 522 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 MYL3P08590 195 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 CYP2C9P11712 490 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 NPR1P16066 1061 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 HDCP19113 662 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 RABGGTBP53611 331 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 FMO1Q01740 532 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 LONRF1Q17RB8 773 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 ZXDCQ2QGD7 858 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 FAM160B1Q5W0V3 765 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 TSHZ3Q63HK5 1081 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 ARMC6Q6NXE6 501 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 USP37Q86T82 979 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 PALM2Q8IXS6 379 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 SDR16C5Q8N3Y7 309 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 GJA10Q969M2 543 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 NMD3Q96D46 503 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 SELENOOQ9BVL4 669 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 APOL5Q9BWW9 433 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 CPEB1Q9BZB8 566 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 TSC22D4Q9Y3Q8 395 aa4.81□□□□□ -1.64
CALCOCO2-220ENST00000511816 A0A0U1RQG5 324 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 GAGE12BA1L429 117 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 KLRG2A4D1S0 409 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 GAGE12HA6NDE8 117 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 POLRMTO00411 1230 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 IL18RAPO95256 599 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 GRPP07492 148 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 ACRV1P26436 265 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 MORC3Q14149 939 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 RRP1BQ14684 758 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 AGAP9Q5VTM2 703 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 SPTY2D1Q68D10 685 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 Q6ZSN1 163 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 GDF7Q7Z4P5 450 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 SRLQ86TD4 932 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 SMCR8Q8TEV9 937 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 MSLNLQ96KJ4 702 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 TBCBQ99426 244 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 P2RX7Q99572 595 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 TINAGL1Q9GZM7 467 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 CD248Q9HCU0 757 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 ARFGAP3Q9NP61 516 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 A1CFQ9NQ94 594 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 STARD7Q9NQZ5 370 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 PARPBPQ9NWS1 579 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 SORCS3Q9UPU3 1222 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 CORO2BQ9UQ03 480 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 MYRFQ9Y2G1 1151 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 MTO1Q9Y2Z2 717 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 USP15Q9Y4E8 981 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 TESMINQ9Y4I5 508 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 NOX1Q9Y5S8 564 aa4.8□□□□□ -1.64
CALCOCO2-220ENST00000511816 USP19O94966 1318 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 E7ENX8 843 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 M0QYG6 137 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 TBX3O15119 743 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 INMTO95050 263 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 SCAF4O95104 1147 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 UNC5CO95185 931 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 ABHD16AO95870 558 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 GPANK1O95872 356 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 PARP1P09874 1014 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 SLC6A2P23975 617 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 SLC6A4P31645 630 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 APOBEC3AP31941 199 aaPredicted RBP4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 HTR3AP46098 478 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 ARFIP2P53365 341 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 RNASE9P60153 205 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 TAP2Q03519 686 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 DAG1Q14118 895 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 HSP90AB4PQ58FF6 505 aa4.79□□□□□ -1.64
CALCOCO2-220ENST00000511816 FAM102AQ5T9C2 384 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms