RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ITGB3P05106 788 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 POLR2BP30876 1174 aaKnown RBP17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 CYP2J2P51589 502 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 NTHL1P78549 312 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 MYBPC2Q14324 1141 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 KCNB1Q14721 858 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 SNRNP35Q16560 246 aaKnown RBP17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 TMEM31Q5JXX7 168 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 WSCD1Q658N2 575 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 RNF19BQ6ZMZ0 732 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 SLC9A9Q8IVB4 645 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 ZNF516Q92618 1163 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 MYADMQ96S97 322 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 RTP3Q9BQQ7 232 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 CYP4F11Q9HBI6 524 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 PTPRJQ12913 1337 aa17.41■□□□□ 0.38
PDLIM5-216ENST00000511767 FAM86C2PA6NEL3 165 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 CST3P01034 146 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 OR4Q2P0C623 313 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 ODC1P11926 461 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 PNPLA4P41247 253 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 CYP24A1Q07973 514 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 ADCY1Q08828 1119 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 PSMD6Q15008 389 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 PTPN21Q16825 1174 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 LMBRD2Q68DH5 695 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 TDRD5Q8NAT2 981 aaKnown RBP17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 GOLGA5Q8TBA6 731 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 TMEM209Q96SK2 561 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 GDAP2Q9NXN4 497 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 EPS15L1Q9UBC2 864 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 ITGA11Q9UKX5 1188 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 DSEQ9UL01 958 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 TECTAO75443 2155 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 C2orf16Q68DN1 1984 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 CLUHO75153 1309 aa17.4■□□□□ 0.38
PDLIM5-216ENST00000511767 PRRG1O14668 218 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 EXOC3O60645 756 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 XYLBO75191 536 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 ASGR2P07307 311 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 LAMP2P13473 410 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 PTPN2P17706 415 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 FSHRP23945 695 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 SV2CQ496J9 727 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 CENPPQ6IPU0 288 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 TRIM67Q6ZTA4 783 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 TRAPPC11Q7Z392 1133 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 LRRTM3Q86VH5 581 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 WDR49Q8IV35 697 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 LRRC52Q8N7C0 313 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 OR10T2Q8NGX3 314 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 CCDC47Q96A33 483 aaKnown RBP17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 CCDC127Q96BQ5 260 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 TIGD1Q96MW7 591 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 MTMR12Q9C0I1 747 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 KCNK12Q9HB15 430 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 HCFC1R1Q9NWW0 138 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 POLIQ9UNA4 740 aa17.39■□□□□ 0.37
PDLIM5-216ENST00000511767 TMEM191BP0C7N4 346 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 GBP2P32456 591 aaPredicted RBP17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 DUSP4Q13115 394 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 POTEHQ6S545 545 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 LIMS2Q7Z4I7 341 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 METTL23Q86XA0 190 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 THEM5Q8N1Q8 247 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 ATAD1Q8NBU5 361 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 PLEKHO2Q8TD55 490 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 ANKRD36BP1Q96IX9 119 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 ZNF560Q96MR9 790 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 ZCWPW1Q9H0M4 648 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 CRISPLD1Q9H336 500 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 AVENQ9NQS1 362 aaPredicted RBP17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 SORCS3Q9UPU3 1222 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 TRAF3IP3Q9Y228 551 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 SLC27A5Q9Y2P5 690 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 NOTCH4Q99466 2003 aa17.38■□□□□ 0.37
PDLIM5-216ENST00000511767 PRR33A8MZF0 331 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 GADD45BO75293 160 aaPredicted RBP17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 PRPF40AO75400 957 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 TNNC2P02585 160 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 LRG1P02750 347 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 KRT19P08727 400 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 DLATP10515 647 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 CPB1P15086 417 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 TNNI1P19237 187 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 CLDN10P78369 228 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 PNOCQ13519 176 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 BMP8AQ7Z5Y6 402 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 ELOA2Q8IYF1 753 aaPredicted RBP17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 GUF1Q8N442 669 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 PDCL2Q8N4E4 241 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 SPATA20Q8TB22 786 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 ITFG1Q8TB96 612 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 PARD3BQ8TEW8 1205 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 HPDLQ96IR7 371 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 PGLYRP2Q96PD5 576 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 FNBP1Q96RU3 617 aa17.37■□□□□ 0.37
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