RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 ZNF280DQ6N043 979 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
COPS4-210ENST00000511708 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 CRISPLD1Q9H336 500 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 ANKEF1Q9NU02 776 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 INVSQ9Y283 1065 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 SMIM28A0A1B0GU29 152 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 PODXLO00592 558 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 DRD1P21728 446 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 RARRES1P49788 294 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 PLD1Q13393 1074 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 PRPF4BQ13523 1007 aaKnown RBP13.15□□□□□ -0.3
COPS4-210ENST00000511708 RUNX3Q13761 415 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 INF2Q27J81 1249 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 DCAF4L1Q3SXM0 396 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 TSGA10IPQ3SY00 556 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 FBXO43Q4G163 708 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
COPS4-210ENST00000511708 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 XKR4Q5GH76 650 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 RASSF3Q86WH2 238 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 RPLP0P6Q8NHW5 317 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 PIGKQ92643 395 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 EZH1Q92800 747 aaPredicted RBP13.15□□□□□ -0.3
COPS4-210ENST00000511708 LRIG1Q96JA1 1093 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 SUSD3Q96L08 255 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 SLC26A6Q9BXS9 759 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 CCDC113Q9H0I3 377 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 CCDC86Q9H6F5 360 aaKnown RBP13.15□□□□□ -0.3
COPS4-210ENST00000511708 GKN1Q9NS71 199 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
COPS4-210ENST00000511708 NAP1L2Q9ULW6 460 aaPredicted RBP13.15□□□□□ -0.3
COPS4-210ENST00000511708 USP20Q9Y2K6 914 aa13.15□□□□□ -0.3
COPS4-210ENST00000511708 OBSL1O75147 1896 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 HECTD1Q9ULT8 2610 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 ACKR2O00590 384 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 CPB1P15086 417 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 IFNAR1P17181 557 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 ENGP17813 658 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 MAPK8P45983 427 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 GALK1P51570 392 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 DGKEP52429 567 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 GPR158Q5T848 1215 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 NCAPH2Q6IBW4 605 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 ALKAL1Q6UXT8 129 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 ACDQ96AP0 544 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 HSD17B14Q9BPX1 270 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 ESYT1Q9BSJ8 1104 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 POLR3CQ9BUI4 534 aaPredicted RBP13.14□□□□□ -0.31
COPS4-210ENST00000511708 NUSAP1Q9BXS6 441 aaKnown RBP13.14□□□□□ -0.31
COPS4-210ENST00000511708 ATXN3LQ9H3M9 355 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
COPS4-210ENST00000511708 THG1LQ9NWX6 298 aaKnown RBP13.14□□□□□ -0.31
COPS4-210ENST00000511708 SPTA1P02549 2419 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 C1QL1O75973 258 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 GABRR2P28476 465 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 DHPSP49366 369 aaPredicted RBP13.13□□□□□ -0.31
COPS4-210ENST00000511708 EPHB3P54753 998 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 MAPK6Q16659 721 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 NAIF1Q69YI7 327 aaPredicted RBP13.13□□□□□ -0.31
COPS4-210ENST00000511708 SLC23A3Q6PIS1 610 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
COPS4-210ENST00000511708 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 ADAMTS14Q8WXS8 1223 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 DDX12PQ92771 950 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 PSMG2Q969U7 264 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
COPS4-210ENST00000511708 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 TASP1Q9H6P5 420 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 TMEM74BQ9NUR3 256 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 TBX20Q9UMR3 447 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 RAXQ9Y2V3 346 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 ASB3Q9Y575 518 aa13.13□□□□□ -0.31
COPS4-210ENST00000511708 GOLGA4Q13439 2230 aaKnown RBP13.13□□□□□ -0.31
COPS4-210ENST00000511708 TNFRSF10BO14763 440 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 FGF19O95750 216 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 PRB1P04280 392 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
COPS4-210ENST00000511708 AMPD2Q01433 879 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 DUSP4Q13115 394 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 HNRNPDQ14103 355 aaKnown RBP13.12□□□□□ -0.31
COPS4-210ENST00000511708 TMEM132AQ24JP5 1023 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 ARHGAP15Q53QZ3 475 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 PEAR1Q5VY43 1037 aaPredicted RBP13.12□□□□□ -0.31
COPS4-210ENST00000511708 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 KRT25Q7Z3Z0 450 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 DNAJB7Q7Z6W7 309 aaPredicted RBP13.12□□□□□ -0.31
COPS4-210ENST00000511708 SYT12Q8IV01 421 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 APPL2Q8NEU8 664 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 OLIG1Q8TAK6 271 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 MDM1Q8TC05 714 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms