RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 OR6C75A6NL08 312 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 PDXKO00764 312 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 VNN2O95498 520 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 ITGB3P05106 788 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 POLR2BP30876 1174 aaKnown RBP17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 CYP2J2P51589 502 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 NTHL1P78549 312 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 MYBPC2Q14324 1141 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 KCNB1Q14721 858 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 SNRNP35Q16560 246 aaKnown RBP17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 TMEM31Q5JXX7 168 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 WSCD1Q658N2 575 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 RNF19BQ6ZMZ0 732 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 SLC9A9Q8IVB4 645 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 ZNF516Q92618 1163 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 MYADMQ96S97 322 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 RTP3Q9BQQ7 232 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 CYP4F11Q9HBI6 524 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 PTPRJQ12913 1337 aa17.41■□□□□ 0.38
PDLIM5-212ENST00000509333 FAM86C2PA6NEL3 165 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 CST3P01034 146 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 OR4Q2P0C623 313 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 ODC1P11926 461 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 PNPLA4P41247 253 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 CYP24A1Q07973 514 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 ADCY1Q08828 1119 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 PSMD6Q15008 389 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 PTPN21Q16825 1174 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 LMBRD2Q68DH5 695 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 TDRD5Q8NAT2 981 aaKnown RBP17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 GOLGA5Q8TBA6 731 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 TMEM209Q96SK2 561 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 GDAP2Q9NXN4 497 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 EPS15L1Q9UBC2 864 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 ITGA11Q9UKX5 1188 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 DSEQ9UL01 958 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 TECTAO75443 2155 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 C2orf16Q68DN1 1984 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 CLUHO75153 1309 aa17.4■□□□□ 0.38
PDLIM5-212ENST00000509333 PRRG1O14668 218 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 EXOC3O60645 756 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 XYLBO75191 536 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 ASGR2P07307 311 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 LAMP2P13473 410 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 PTPN2P17706 415 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 FSHRP23945 695 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 SV2CQ496J9 727 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 CENPPQ6IPU0 288 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 TRIM67Q6ZTA4 783 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 TRAPPC11Q7Z392 1133 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 LRRTM3Q86VH5 581 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 WDR49Q8IV35 697 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 LRRC52Q8N7C0 313 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 OR10T2Q8NGX3 314 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 CCDC47Q96A33 483 aaKnown RBP17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 CCDC127Q96BQ5 260 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 TIGD1Q96MW7 591 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 MTMR12Q9C0I1 747 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 KCNK12Q9HB15 430 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 HCFC1R1Q9NWW0 138 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 POLIQ9UNA4 740 aa17.39■□□□□ 0.37
PDLIM5-212ENST00000509333 TMEM191BP0C7N4 346 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 GBP2P32456 591 aaPredicted RBP17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 DUSP4Q13115 394 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 POTEHQ6S545 545 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 LIMS2Q7Z4I7 341 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 METTL23Q86XA0 190 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 THEM5Q8N1Q8 247 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 ATAD1Q8NBU5 361 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 PLEKHO2Q8TD55 490 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 ANKRD36BP1Q96IX9 119 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 ZNF560Q96MR9 790 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 ZCWPW1Q9H0M4 648 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 CRISPLD1Q9H336 500 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 AVENQ9NQS1 362 aaPredicted RBP17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 SORCS3Q9UPU3 1222 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 TRAF3IP3Q9Y228 551 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 SLC27A5Q9Y2P5 690 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 NOTCH4Q99466 2003 aa17.38■□□□□ 0.37
PDLIM5-212ENST00000509333 PRR33A8MZF0 331 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 GADD45BO75293 160 aaPredicted RBP17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 PRPF40AO75400 957 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 TNNC2P02585 160 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 LRG1P02750 347 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 KRT19P08727 400 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 DLATP10515 647 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 CPB1P15086 417 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 TNNI1P19237 187 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 CLDN10P78369 228 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 PNOCQ13519 176 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 BMP8AQ7Z5Y6 402 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 ELOA2Q8IYF1 753 aaPredicted RBP17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 GUF1Q8N442 669 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 PDCL2Q8N4E4 241 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 SPATA20Q8TB22 786 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 ITFG1Q8TB96 612 aa17.37■□□□□ 0.37
PDLIM5-212ENST00000509333 PARD3BQ8TEW8 1205 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms