RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 LAMA5O15230 3695 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 EVPLQ92817 2033 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 TICRRQ7Z2Z1 1910 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 APC2O95996 2303 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 TNFRSF10BO14763 440 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 CYTH3O43739 400 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 SH3BP5O60239 455 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 FOSP01100 380 aaPredicted RBP4.28□□□□□ -1.72
RNF4-211ENST00000509206 GJA1P17302 382 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 DRD1P21728 446 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 ITPKBP27987 946 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 GNAQP50148 359 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 CSRP3P50461 194 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 CXADRP78310 365 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 DSC1Q08554 894 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 NR5A1Q13285 461 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 SLC14A1Q13336 389 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 ZNF211Q13398 564 aaPredicted RBP4.28□□□□□ -1.72
RNF4-211ENST00000509206 DMC1Q14565 340 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 TEAD2Q15562 447 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 FBXO43Q4G163 708 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 PREPLQ4J6C6 727 aaPredicted RBP4.28□□□□□ -1.72
RNF4-211ENST00000509206 C4orf17Q53FE4 359 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 CCDC157Q569K6 752 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 C2orf27AQ580R0 203 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 COLEC12Q5KU26 742 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 PPP1R26Q5T8A7 1209 aaPredicted RBP4.28□□□□□ -1.72
RNF4-211ENST00000509206 LYSMD4Q5XG99 296 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 ANO7Q6IWH7 933 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 ZNF746Q6NUN9 644 aaPredicted RBP4.28□□□□□ -1.72
RNF4-211ENST00000509206 PKN3Q6P5Z2 889 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 SLC23A3Q6PIS1 610 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 TMPRSS7Q7RTY8 843 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 PRICKLE2Q7Z3G6 844 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 RABEPKQ7Z6M1 372 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 PGBD3Q8N328 593 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 MINDY1Q8N5J2 469 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 LEMD2Q8NC56 503 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 RPLP0P6Q8NHW5 317 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 ZFYVE19Q96K21 471 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 ZFP42Q96MM3 310 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 CAMK1GQ96NX5 476 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 LZTS2Q9BRK4 669 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 TPSD1Q9BZJ3 242 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 PRORYQ9H606 182 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 ETNK1Q9HBU6 452 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 AGPAT5Q9NUQ2 364 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 POLR3BQ9NW08 1133 aaPredicted RBP4.28□□□□□ -1.72
RNF4-211ENST00000509206 MIOSQ9NXC5 875 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 BCCIPQ9P287 314 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNF4-211ENST00000509206 SEPT3Q9UH03 358 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 SERTAD1Q9UHV2 236 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 TPCN1Q9ULQ1 816 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 GIT1Q9Y2X7 761 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 IPPQ9Y573 584 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 PAXBP1Q9Y5B6 917 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 AK5Q9Y6K8 562 aa4.28□□□□□ -1.72
RNF4-211ENST00000509206 DOCK6Q96HP0 2047 aa4.28□□□□□ -1.73
RNF4-211ENST00000509206 ASCC3Q8N3C0 2202 aaKnown RBP4.27□□□□□ -1.73
RNF4-211ENST00000509206 ZMYM2Q9UBW7 1377 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 ZMYM6O95789 1325 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 MTCL1Q9Y4B5 1905 aaKnown RBP4.27□□□□□ -1.73
RNF4-211ENST00000509206 CASTOR2A6NHX0 329 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 WDR64B1ANS9 1081 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 J3QL48 77 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 MEIS1O00470 390 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 ADAM12O43184 909 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 TRAPPC3O43617 180 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 ICMTO60725 284 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 LILRA1O75019 489 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 EFEMP2O95967 443 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 C6P13671 934 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 HLA-EP13747 358 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 AKAP5P24588 427 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 EIF2S3P41091 472 aaKnown RBP4.27□□□□□ -1.73
RNF4-211ENST00000509206 IL12RB1P42701 662 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 MARSP56192 900 aaKnown RBP4.27□□□□□ -1.73
RNF4-211ENST00000509206 PRKCEQ02156 737 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 RHDQ02161 417 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 SEMG2Q02383 582 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 CYP4A11Q02928 519 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 GRIK3Q13003 919 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 TUSC3Q13454 348 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 DRP2Q13474 957 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 ARHGAP15Q53QZ3 475 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 PRSS36Q5K4E3 855 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 CC2D1AQ6P1N0 951 aaPredicted RBP4.27□□□□□ -1.73
RNF4-211ENST00000509206 NOTUMQ6P988 496 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 ANKS3Q6ZW76 656 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 SYT13Q7L8C5 426 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 HEATR3Q7Z4Q2 680 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 SRGAP1Q7Z6B7 1085 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 KSR1Q8IVT5 923 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 ARID3BQ8IVW6 561 aaPredicted RBP4.27□□□□□ -1.73
RNF4-211ENST00000509206 NAXDQ8IW45 347 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 EXOC8Q8IYI6 725 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 LINC01465Q8N7H1 131 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 ENGASEQ8NFI3 743 aa4.27□□□□□ -1.73
RNF4-211ENST00000509206 ZNF461Q8TAF7 563 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms