RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ZNF202O95125 648 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 SPDEFO95238 335 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 NDUFA10O95299 355 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 HLA-DOAP06340 250 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 HMGB1P09429 215 aaKnown RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 C6P13671 934 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 NPR1P16066 1061 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 KCNA2P16389 499 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 HDCP19113 662 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 DDX6P26196 483 aaKnown RBP eCLIP3.68□□□□□ -1.82
GYPB-207ENST00000506679 ZNF135P52742 658 aaPredicted RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 SOX8P57073 446 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 PSMC1P62191 440 aaKnown RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 TAP2Q03519 686 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 EXOSC9Q06265 439 aaKnown RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 HABP2Q14520 560 aaPredicted RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 CNN3Q15417 329 aaKnown RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 CCDC157Q569K6 752 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 KHDC1LQ5JSQ8 128 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 Q6ZPA2 131 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 SH2D3CQ8N5H7 860 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 IL31RAQ8NI17 732 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 POC1BQ8TC44 478 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 DDX17Q92841 729 aaKnown RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 TNPO1Q92973 898 aaKnown RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 TRIM54Q9BYV2 358 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 IMPG2Q9BZV3 1241 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 MMRN2Q9H8L6 949 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 FAM204AQ9H8W3 233 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 ARMT1Q9H993 441 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 RSAD1Q9HA92 442 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 DDX21Q9NR30 783 aaKnown RBP eCLIP3.68□□□□□ -1.82
GYPB-207ENST00000506679 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 MRPS18AQ9NVS2 196 aaKnown RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 STAP2Q9UGK3 403 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 PCDHA6Q9UN73 950 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 CDYLQ9Y232 598 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 MAP3K2Q9Y2U5 619 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 NEU2Q9Y3R4 380 aa3.68□□□□□ -1.82
GYPB-207ENST00000506679 FRMPD2Q68DX3 1309 aaPredicted RBP3.68□□□□□ -1.82
GYPB-207ENST00000506679 KIF3BO15066 747 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 CDKL5O76039 1030 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 SUN1O94901 812 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 ABHD16AO95870 558 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 EGR2P11161 476 aaPredicted RBP3.67□□□□□ -1.82
GYPB-207ENST00000506679 PIM1P11309 404 aaPredicted RBP3.67□□□□□ -1.82
GYPB-207ENST00000506679 RHCEP18577 417 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 MAKP20794 623 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 FDXRP22570 491 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 ACVRL1P37023 503 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 PHKA1P46020 1223 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 TOB1P50616 345 aaPredicted RBP3.67□□□□□ -1.82
GYPB-207ENST00000506679 VAV2P52735 878 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 ZXDAP98168 799 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 RHDQ02161 417 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 PIGFQ07326 219 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 RESTQ13127 1097 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 TP53BP2Q13625 1128 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 TIGD2Q4W5G0 525 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 TAPT1Q6NXT6 567 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 APOA5Q6Q788 366 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 USP37Q86T82 979 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 SYNE4Q8N205 404 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 AMER2Q8N7J2 671 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 FAM156AQ8NDB6 213 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 SLC17A8Q8NDX2 589 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 PROKR1Q8TCW9 393 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 KBTBD7Q8WVZ9 684 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 TIFAQ96CG3 184 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 CNPPD1Q9BV87 410 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 ALOXE3Q9BYJ1 711 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 ZNF341Q9BYN7 854 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 SIK2Q9H0K1 926 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 UNKLQ9H9P5 680 aaKnown RBP3.67□□□□□ -1.82
GYPB-207ENST00000506679 GALNT9Q9HCQ5 603 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 SARS2Q9NP81 518 aaKnown RBP3.67□□□□□ -1.82
GYPB-207ENST00000506679 SLAMF7Q9NQ25 335 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 PIH1D1Q9NWS0 290 aaKnown RBP3.67□□□□□ -1.82
GYPB-207ENST00000506679 GEMIN8Q9NWZ8 242 aaKnown RBP3.67□□□□□ -1.82
GYPB-207ENST00000506679 RNF181Q9P0P0 153 aa3.67□□□□□ -1.82
GYPB-207ENST00000506679 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.67□□□□□ -1.82
GYPB-207ENST00000506679 PRAMEF33A0A0G2JMD5 474 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 A0A1W2PPL8 197 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 PRAMEF10O60809 474 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 FZD7O75084 574 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 ERN1O75460 977 aaKnown RBP3.66□□□□□ -1.82
GYPB-207ENST00000506679 GNAI2P04899 355 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 KRT4P19013 534 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 EN2P19622 333 aaPredicted RBP3.66□□□□□ -1.82
GYPB-207ENST00000506679 MCM7P33993 719 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 GNALP38405 381 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 ANXA11P50995 505 aaKnown RBP3.66□□□□□ -1.82
GYPB-207ENST00000506679 CACNB3P54284 484 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 FAM193AP78312 1265 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 MC2RQ01718 297 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 GUCY1B3Q02153 619 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 ZNF844Q08AG5 666 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 SEMA5AQ13591 1074 aa3.66□□□□□ -1.82
GYPB-207ENST00000506679 HLTFQ14527 1009 aaKnown RBP eCLIP3.66□□□□□ -1.82
GYPB-207ENST00000506679 LLGL1Q15334 1064 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms