RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 DEPDC1BQ8WUY9 529 aa13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 POMGNT1Q8WZA1 660 aa13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 SLITRK6Q9H5Y7 841 aa13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 MRPL44Q9H9J2 332 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 TRPV4Q9HBA0 871 aa13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 HEBP1Q9NRV9 189 aa13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 HSFX1Q9UBD0 423 aa13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 FBXO4Q9UKT5 387 aa13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 MTF2Q9Y483 593 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 R4GN57 208 aa13.06□□□□□ -0.32
PDLIM7-214ENST00000505746 CACNA1HO95180 2353 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 USP34Q70CQ2 3546 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 SPTLC1O15269 473 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 MOSPD3O75425 235 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 IL18RAPO95256 599 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 VNN2O95498 520 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 FGF19O95750 216 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 CYP11A1P05108 521 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 RPS9P46781 194 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 TUFMP49411 452 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 TEAD2Q15562 447 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 ZNF528Q3MIS6 628 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 CCDC73Q6ZRK6 1079 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 NT5DC4Q86YG4 428 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 THEM5Q8N1Q8 247 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 ZSCAN18Q8TBC5 510 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 CLDN23Q96B33 292 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 INTS4Q96HW7 963 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 ZSWIM3Q96MP5 696 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 TRPV5Q9NQA5 729 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 DPP3Q9NY33 737 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 PCDHB13Q9Y5F0 798 aa13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-214ENST00000505746 DOCK8Q8NF50 2099 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 A0A1W2PRU2 124 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 MTMR11A4FU01 709 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 TISP43B9A030 160 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 CYB561D2O14569 222 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 ZNF263O14978 683 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 PPP1R37O75864 691 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 GJA1P17302 382 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 TARSP26639 723 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 GDI1P31150 447 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 VIPR2P41587 438 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 TAF6P49848 677 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 SMARCB1Q12824 385 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 ALCAMQ13740 583 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 VITQ6UXI7 678 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 DNAJB7Q7Z6W7 309 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 ITIH5Q86UX2 942 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 MFSD6LQ8IWD5 586 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 YAF2Q8IY57 180 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 MAML2Q8IZL2 1156 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 ATAD1Q8NBU5 361 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 SHKBP1Q8TBC3 707 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 ACCSQ96QU6 501 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 STRA6Q9BX79 667 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 LRRC3Q9BY71 257 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 CRISPLD1Q9H336 500 aa13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 ZFHX2Q9C0A1 2572 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-214ENST00000505746 MYMKA6NI61 221 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 HEPACAM2A8MVW5 462 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 NRG2O14511 850 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 KINO60870 393 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 GCNT3O95395 438 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 IDEP14735 1019 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 ADSSP30520 456 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 PNPLA4P41247 253 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 STAT6P42226 847 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 CSTF1Q05048 431 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 VEPH1Q14D04 833 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 SLC39A14Q15043 492 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 SV2CQ496J9 727 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 SLC39A12Q504Y0 691 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 CRELD2Q6UXH1 353 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 TMC8Q8IU68 726 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 OR10T2Q8NGX3 314 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 FAM200AQ8TCP9 573 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 C2orf15Q8WU43 125 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 PSMG2Q969U7 264 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 DNAJC19Q96DA6 116 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 TMEM209Q96SK2 561 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 ZCWPW1Q9H0M4 648 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 OLFML3Q9NRN5 406 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 TBC1D7Q9P0N9 293 aa13.03□□□□□ -0.32
PDLIM7-214ENST00000505746 KPNA7A9QM74 516 aa13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 TULP1O00294 542 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-214ENST00000505746 GARTP22102 1010 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms