RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 DSTYKQ6XUX3 929 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 TRIM59Q8IWR1 403 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 APPL2Q8NEU8 664 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 RIN2Q8WYP3 895 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 SLC35C1Q96A29 364 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 HPDLQ96IR7 371 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 B3GALT6Q96L58 329 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 CNOT6LQ96LI5 555 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 BPIFA3Q9BQP9 254 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 VRTNQ9H8Y1 702 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 RXFP1Q9HBX9 757 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 GDAP2Q9NXN4 497 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 FNIP2Q9P278 1114 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 PCDHGC5Q9Y5F6 944 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 GREB1Q4ZG55 1949 aa12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 ZNF638Q14966 1978 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-208ENST00000504489 DENND4CQ5VZ89 1909 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 HIDE1A8MVS5 230 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 PMM2O15305 246 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 CYP11A1P05108 521 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 ODC1P11926 461 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 TYMPP19971 482 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 MYL6P60660 151 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 MYL5Q02045 173 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 CREMQ03060 361 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 NCOA4Q13772 614 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 MRPL58Q14197 206 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 SGSM1Q2NKQ1 1148 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 DCAF17Q5H9S7 520 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 KRT39Q6A163 491 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 ANKS3Q6ZW76 656 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 CEP57Q86XR8 500 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 LNX1Q8TBB1 728 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 AUTS2Q8WXX7 1259 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 TAF4BQ92750 862 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 PPP2R3CQ969Q6 453 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 XYLT2Q9H1B5 865 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 DSEQ9UL01 958 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 COQ4Q9Y3A0 265 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 NFE2L3Q9Y4A8 694 aa12.8□□□□□ -0.36
PDLIM5-208ENST00000504489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 FSD2A1L4K1 749 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 H7C4K7 107 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 C2CD2LO14523 706 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 CYB561D2O14569 222 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 N4BP1O75113 896 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 OAZ2O95190 189 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 CSPG5O95196 566 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 CAVIN2O95810 425 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 HLA-DRAP01903 254 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 CNPP09543 421 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 FAM163BP0C2L3 166 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 FMO5P49326 533 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 MXI1P50539 228 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 PSMD5Q16401 504 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 ARSIQ5FYB1 569 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 TCEAL5Q5H9L2 206 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 DPH6Q7L8W6 267 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 LIMS2Q7Z4I7 341 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 ADGRD2Q7Z7M1 963 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 KLHL5Q96PQ7 755 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 CDCA3Q99618 268 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 EMILIN2Q9BXX0 1053 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 TLE6Q9H808 572 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 MMRN2Q9H8L6 949 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 SAMSN1Q9NSI8 373 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 MAGEC2Q9UBF1 373 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 MTRRQ9UBK8 725 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 BACE2Q9Y5Z0 518 aa12.79□□□□□ -0.36
PDLIM5-208ENST00000504489 P4HA2O15460 535 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 NCK2O43639 380 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 TBC1D4O60343 1298 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 HUS1O60921 280 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 C1RP00736 705 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 ASS1P00966 412 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 EEF1GP26641 437 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 CA8P35219 290 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 PIK3CAP42336 1068 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 ZNF165P49910 485 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 HYAL1Q12794 435 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 KCNH2Q12809 1159 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 NCAPHQ15003 741 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 DUSP6Q16828 381 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 ZNF699Q32M78 642 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 CBWD6Q4V339 395 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 CBWD3Q5JTY5 395 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 CBWD5Q5RIA9 395 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 CDKAL1Q5VV42 579 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 PRSS55Q6UWB4 352 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 TMEM86AQ8N2M4 240 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 TOP6BLQ8N6T0 577 aa12.78□□□□□ -0.36
PDLIM5-208ENST00000504489 FBXL13Q8NEE6 735 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms