RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PACSIN1Q9BY11 444 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 FAM126AQ9BYI3 521 aaPredicted RBP5.29□□□□□ -1.56
SMC4-227ENST00000497984 KLC4Q9NSK0 619 aa5.29□□□□□ -1.56
SMC4-227ENST00000497984 TLDC2A0PJX2 215 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 LINC01548A6NM66 108 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 E9PLN8 166 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
SMC4-227ENST00000497984 MAPK7Q13164 816 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 TAPT1Q6NXT6 567 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 MIGA2Q7L4E1 593 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 B3GALNT2Q8NCR0 500 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 SEMA6DQ8NFY4 1073 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 PBKQ96KB5 322 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 DMRTA2Q96SC8 542 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 VKORC1Q9BQB6 163 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 IMPG2Q9BZV3 1241 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.28□□□□□ -1.56
SMC4-227ENST00000497984 IPPQ9Y573 584 aa5.28□□□□□ -1.56
SMC4-227ENST00000497984 ZNF804BA4D1E1 1349 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 NDUFS2O75306 463 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 URI1O94763 535 aaPredicted RBP5.27□□□□□ -1.57
SMC4-227ENST00000497984 NPTX2P47972 431 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 TLE1Q04724 770 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 PIGFQ07326 219 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 SLC10A2Q12908 348 aaPredicted RBP5.27□□□□□ -1.57
SMC4-227ENST00000497984 EIF2B5Q13144 721 aaKnown RBP5.27□□□□□ -1.57
SMC4-227ENST00000497984 LLGL1Q15334 1064 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 INAVAQ3KP66 663 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 ZNF782Q6ZMW2 699 aaPredicted RBP5.27□□□□□ -1.57
SMC4-227ENST00000497984 AMOTL1Q8IY63 956 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 VGLL2Q8N8G2 317 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 SLC17A8Q8NDX2 589 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 POC1BQ8TC44 478 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 FBXO41Q8TF61 875 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 JADE3Q92613 823 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 RFKQ969G6 155 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 SERGEFQ9UGK8 458 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 SAP30BPQ9UHR5 308 aaKnown RBP5.27□□□□□ -1.57
SMC4-227ENST00000497984 PHLDB1Q86UU1 1377 aa5.27□□□□□ -1.57
SMC4-227ENST00000497984 TP73O15350 636 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 LATS1O95835 1130 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 RHOP08100 348 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 C5AR1P21730 350 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 LPOP22079 712 aaPredicted RBP5.26□□□□□ -1.57
SMC4-227ENST00000497984 EDNRBP24530 442 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 IL10RAQ13651 578 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 RAB39AQ14964 217 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 C11orf87Q6NUJ2 197 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 FAM9AQ8IZU1 332 aaPredicted RBP5.26□□□□□ -1.57
SMC4-227ENST00000497984 CBARPQ8N350 705 aaPredicted RBP5.26□□□□□ -1.57
SMC4-227ENST00000497984 HDAC10Q969S8 669 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 TRIB1Q96RU8 372 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 LIMCH1Q9UPQ0 1083 aa5.26□□□□□ -1.57
SMC4-227ENST00000497984 SPATA31A3Q5VYP0 1347 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 HTRA2O43464 458 aaPredicted RBP5.25□□□□□ -1.57
SMC4-227ENST00000497984 ANXA1P04083 346 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 DRD4P21917 467 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 PCSK6P29122 969 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 CTGFP29279 349 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 RGS19P49795 217 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 C3orf36Q3SXR2 165 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 FAM153CQ494X1 144 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 MTX3Q5HYI7 312 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.25□□□□□ -1.57
SMC4-227ENST00000497984 PADI4Q9UM07 663 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 PCDHB1Q9Y5F3 818 aa5.25□□□□□ -1.57
SMC4-227ENST00000497984 A0A0B4J269 797 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 TTLL1O95922 423 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 PRR35P0CG20 571 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 NR2F6P10588 404 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 GRM1Q13255 1194 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 TUBB3Q13509 450 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 CLUL1Q15846 466 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 ZNF626Q68DY1 528 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 SDE2Q6IQ49 451 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 GIMAP6Q6P9H5 292 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 CAMKK1Q8N5S9 505 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 C1orf162Q8NEQ5 155 aaPredicted RBP5.24□□□□□ -1.57
SMC4-227ENST00000497984 OSBPL9Q96SU4 736 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 SMOQ99835 787 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 ALG8Q9BVK2 526 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 ETAA1Q9NY74 926 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 CALCOCO1Q9P1Z2 691 aa5.24□□□□□ -1.57
SMC4-227ENST00000497984 CNGA1P29973 690 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 IARSP41252 1262 aaKnown RBP5.23□□□□□ -1.57
SMC4-227ENST00000497984 CCT8P50990 548 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 SLC16A1P53985 500 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 TMEM119Q4V9L6 283 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 SUMO4Q6EEV6 95 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 ZNF66Q6ZN08 573 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 GADL1Q6ZQY3 521 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 PDSS2Q86YH6 399 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 CNTD1Q8N815 330 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 CLPTM1LQ96KA5 538 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 KRTAP1-5Q9BYS1 174 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 AMBRA1Q9C0C7 1298 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 DKK3Q9UBP4 350 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 NR2E3Q9Y5X4 410 aa5.23□□□□□ -1.57
SMC4-227ENST00000497984 CCDC154A6NI56 674 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 TARM1B6A8C7 271 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms