RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SLC23A1Q9UHI7 598 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 CPA4Q9UI42 421 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 ING1Q9UK53 422 aaPredicted RBP4.97□□□□□ -1.61
SMC4-225ENST00000497203 ZDHHC8Q9ULC8 765 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 RUVBL1Q9Y265 456 aaKnown RBP4.97□□□□□ -1.61
SMC4-225ENST00000497203 PCDHA1Q9Y5I3 950 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 DRGXA6NNA5 263 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 RHPN2P1A8MT19 583 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 ZNF185O15231 689 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 GRM6O15303 877 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 RECQL4O94761 1208 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 SLPIP03973 132 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 MGAT1P26572 445 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 SLC7A1P30825 629 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 CHN2P52757 468 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 ABHD18Q0P651 414 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 FAM102AQ5T9C2 384 aaPredicted RBP4.96□□□□□ -1.62
SMC4-225ENST00000497203 EMC10Q5UCC4 262 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 GDF7Q7Z4P5 450 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 SRLQ86TD4 932 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 DPP9Q86TI2 863 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 FAM90A1Q86YD7 464 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 EXOC8Q8IYI6 725 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 DCBLD1Q8N8Z6 715 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 IL17RDQ8NFM7 739 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 PARD3BQ8TEW8 1205 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 ZC3H10Q96K80 434 aaKnown RBP4.96□□□□□ -1.62
SMC4-225ENST00000497203 PHACTR3Q96KR7 559 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 NT5C1BQ96P26 610 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 ZNF287Q9HBT7 754 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 RLIMQ9NVW2 624 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 CFAP97Q9P2B7 532 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 OGDHLQ9ULD0 1010 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 PAXBP1Q9Y5B6 917 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 SNX13Q9Y5W8 968 aa4.96□□□□□ -1.62
SMC4-225ENST00000497203 KIAA0391O15091 583 aaKnown RBP4.95□□□□□ -1.62
SMC4-225ENST00000497203 POMCP01189 267 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 KITP10721 976 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 ZKSCAN1P17029 563 aaPredicted RBP4.95□□□□□ -1.62
SMC4-225ENST00000497203 MCM7P33993 719 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 ALDH5A1P51649 535 aaPredicted RBP4.95□□□□□ -1.62
SMC4-225ENST00000497203 HMGA2P52926 109 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 BTKQ06187 659 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 PDCD4Q53EL6 469 aaKnown RBP4.95□□□□□ -1.62
SMC4-225ENST00000497203 ZNF529Q6P280 563 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 USP51Q70EK9 711 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 RHOUQ7L0Q8 258 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 PPP1R3BQ86XI6 285 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 SPICE1Q8N0Z3 855 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 KBTBD7Q8WVZ9 684 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 CCDC138Q96M89 665 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 DCLRE1CQ96SD1 692 aaKnown RBP4.95□□□□□ -1.62
SMC4-225ENST00000497203 TBCBQ99426 244 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 SELENOOQ9BVL4 669 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 APOL5Q9BWW9 433 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 SLC46A2Q9BY10 475 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 FBXO34Q9NWN3 711 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 FAM30AQ9NZY2 134 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 PCDHA6Q9UN73 950 aa4.95□□□□□ -1.62
SMC4-225ENST00000497203 RASA4BC9J798 803 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 MYO1FO00160 1098 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 CYR61O00622 381 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 RASA4O43374 803 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 SLC43A1O75387 559 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 NCR1O76036 304 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 HAUS5O94927 633 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 ANXA1P04083 346 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 BRAFP15056 766 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 NPR1P16066 1061 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 EN2P19622 333 aaPredicted RBP4.94□□□□□ -1.62
SMC4-225ENST00000497203 MAKP20794 623 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 SLC6A2P23975 617 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 KCNJ5P48544 419 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 SOX8P57073 446 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 UBXN2BQ14CS0 331 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 CNGA2Q16280 664 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 CCDC93Q567U6 631 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 MED25Q71SY5 747 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 UBE3BQ7Z3V4 1068 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 MRGPREQ86SM8 312 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 PDSS2Q86YH6 399 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 OR6B3Q8NGW1 331 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 LARP4BQ92615 738 aaKnown RBP4.94□□□□□ -1.62
SMC4-225ENST00000497203 HAS1Q92839 578 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 DDX17Q92841 729 aaKnown RBP4.94□□□□□ -1.62
SMC4-225ENST00000497203 TNPO1Q92973 898 aaKnown RBP4.94□□□□□ -1.62
SMC4-225ENST00000497203 LENG9Q96B70 501 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 MRGPRX1Q96LB2 322 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 MLST8Q9BVC4 326 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 UNKQ9C0B0 810 aaKnown RBP4.94□□□□□ -1.62
SMC4-225ENST00000497203 PCED1AQ9H1Q7 454 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 BRD9Q9H8M2 597 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 RSAD1Q9HA92 442 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 PNPLA8Q9NP80 782 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 JKAMPQ9P055 326 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 TAGLN3Q9UI15 199 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 PADI4Q9UM07 663 aa4.94□□□□□ -1.62
SMC4-225ENST00000497203 USP15Q9Y4E8 981 aaPredicted RBP4.94□□□□□ -1.62
SMC4-225ENST00000497203 LPXNO60711 386 aa4.93□□□□□ -1.62
SMC4-225ENST00000497203 PRSS23O95084 383 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms