RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ZNF287Q9HBT7 754 aa7.16□□□□□ -1.26
CCDC39-207ENST00000495817 SRRDQ9UH36 339 aa7.16□□□□□ -1.26
CCDC39-207ENST00000495817 OGDHLQ9ULD0 1010 aa7.16□□□□□ -1.26
CCDC39-207ENST00000495817 PADI4Q9UM07 663 aa7.16□□□□□ -1.26
CCDC39-207ENST00000495817 SORCS3Q9UPU3 1222 aa7.16□□□□□ -1.26
CCDC39-207ENST00000495817 USP19O94966 1318 aa7.16□□□□□ -1.26
CCDC39-207ENST00000495817 GAGE12BA1L429 117 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 GAGE12HA6NDE8 117 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 NPIPB8E9PQR5 432 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 GRM6O15303 877 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 NARSO43776 548 aaKnown RBP7.15□□□□□ -1.26
CCDC39-207ENST00000495817 SCAF4O95104 1147 aaKnown RBP7.15□□□□□ -1.26
CCDC39-207ENST00000495817 RAP2AP10114 183 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 MAKP20794 623 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 ACVRL1P37023 503 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 ARFIP2P53365 341 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 DGCR2P98153 550 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 SLC25A3Q00325 362 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 FMO1Q01740 532 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 DHX8Q14562 1220 aaKnown RBP7.15□□□□□ -1.26
CCDC39-207ENST00000495817 GRAMD1BQ3KR37 738 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 ATXN7L2Q5T6C5 722 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-207ENST00000495817 ANKS6Q68DC2 871 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 ZNF276Q8N554 614 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 CPT1CQ8TCG5 803 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 LENG9Q96B70 501 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 MSLNLQ96KJ4 702 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 RIPOR3Q96MK2 946 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 MRI1Q9BV20 369 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 STARD7Q9NQZ5 370 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-207ENST00000495817 FNIP2Q9P278 1114 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 SLC23A1Q9UHI7 598 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 PCDHA6Q9UN73 950 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 RUVBL1Q9Y265 456 aaKnown RBP7.15□□□□□ -1.26
CCDC39-207ENST00000495817 CHST2Q9Y4C5 530 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 SNX13Q9Y5W8 968 aa7.15□□□□□ -1.26
CCDC39-207ENST00000495817 TBX3O15119 743 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 GNAI3P08754 354 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 ATP5JP18859 108 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 APOBEC3AP31941 199 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-207ENST00000495817 GNAI1P63096 354 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 ZNF543Q08ER8 600 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 FAM83BQ5T0W9 1011 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 C1orf228Q6PIY5 440 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 GDF7Q7Z4P5 450 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 SYNE4Q8N205 404 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 NLGN4YQ8NFZ3 816 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-207ENST00000495817 SLC35B2Q8TB61 432 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 C1orf43Q9BWL3 253 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 COLEC11Q9BWP8 271 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 TRIM54Q9BYV2 358 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 DPH1Q9BZG8 443 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 TMPRSS5Q9H3S3 457 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 RLIMQ9NVW2 624 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 POGKQ9P215 609 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 CORO2BQ9UQ03 480 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 MED16Q9Y2X0 877 aa7.14□□□□□ -1.27
CCDC39-207ENST00000495817 KPNA5O15131 536 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 FAM20BO75063 409 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 SLC43A1O75387 559 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 MATN4O95460 622 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 SPATA31D3P0C874 917 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 BRAFP15056 766 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 NHLH2Q02577 135 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 KIF22Q14807 665 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 CSRP2Q16527 193 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 CCDC93Q567U6 631 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 FNDC7Q5VTL7 733 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 SPATA31D4Q6ZUB0 917 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 AMER2Q8N7J2 671 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 RNF169Q8NCN4 708 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 PNPLA8Q9NP80 782 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 TRMT13Q9NUP7 481 aaKnown RBP7.13□□□□□ -1.27
CCDC39-207ENST00000495817 CFAP97Q9P2B7 532 aa7.13□□□□□ -1.27
CCDC39-207ENST00000495817 IL18RAPO95256 599 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 AHSGP02765 367 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 ADH4P08319 380 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 SBK3P0C264 359 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 ALAS1P13196 640 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 TNFSF4P23510 183 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 SUMO3P55854 103 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-207ENST00000495817 SOX8P57073 446 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 CHAF1AQ13111 956 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-207ENST00000495817 STK3Q13188 491 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 DAG1Q14118 895 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 ZRSR2Q15696 482 aaKnown RBP7.12□□□□□ -1.27
CCDC39-207ENST00000495817 IZUMO3Q5VZ72 239 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 LRRC55Q6ZSA7 311 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 PDSS2Q86YH6 399 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 SYT12Q8IV01 421 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 CELF5Q8N6W0 485 aaKnown RBP7.12□□□□□ -1.27
CCDC39-207ENST00000495817 OR6B3Q8NGW1 331 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 BRI3BPQ8WY22 251 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 HAS1Q92839 578 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 TNPO1Q92973 898 aaKnown RBP7.12□□□□□ -1.27
CCDC39-207ENST00000495817 NMD3Q96D46 503 aaKnown RBP7.12□□□□□ -1.27
CCDC39-207ENST00000495817 PACSIN1Q9BY11 444 aa7.12□□□□□ -1.27
CCDC39-207ENST00000495817 REXO4Q9GZR2 422 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms