RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 NCANO14594 1321 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 KRT18P05783 430 aaKnown RBP23.97■■□□□ 1.43
HDDC3-203ENST00000494993 LONP1P36776 959 aaKnown RBP23.97■■□□□ 1.43
HDDC3-203ENST00000494993 VIPR2P41587 438 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 GRIN1Q05586 938 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 DUSP4Q13115 394 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 MYBPC2Q14324 1141 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 KARSQ15046 597 aaKnown RBP23.97■■□□□ 1.43
HDDC3-203ENST00000494993 LARP1BQ659C4 914 aaKnown RBP23.97■■□□□ 1.43
HDDC3-203ENST00000494993 JADE1Q6IE81 842 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 SLC39A4Q6P5W5 647 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 TMC8Q8IU68 726 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 ZNF687Q8N1G0 1237 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 DCLK2Q8N568 766 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 FAM212AQ96EL1 285 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 FIZ1Q96SL8 496 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 GPR88Q9GZN0 384 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 DNAJC25Q9H1X3 360 aa23.97■■□□□ 1.43
HDDC3-203ENST00000494993 PRMT8Q9NR22 394 aaPredicted RBP23.97■■□□□ 1.43
HDDC3-203ENST00000494993 CPSF3Q9UKF6 684 aaKnown RBP23.97■■□□□ 1.43
HDDC3-203ENST00000494993 NDRG2Q9UN36 371 aaKnown RBP23.97■■□□□ 1.43
HDDC3-203ENST00000494993 KIF26AQ9ULI4 1882 aaPredicted RBP23.96■■□□□ 1.43
HDDC3-203ENST00000494993 TBCAO75347 108 aaKnown RBP23.96■■□□□ 1.43
HDDC3-203ENST00000494993 EPHB3P54753 998 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 LILRA4P59901 499 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 MFSD6LQ8IWD5 586 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 ZBTB44Q8NCP5 570 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 RASSF8Q8NHQ8 419 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 ATRIPQ8WXE1 791 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 NELL1Q92832 810 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 RMDN1Q96DB5 314 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 SENP8Q96LD8 212 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 ZHX3Q9H4I2 956 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 SLITRK6Q9H5Y7 841 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 ZSCAN32Q9NX65 697 aa23.96■■□□□ 1.43
HDDC3-203ENST00000494993 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.96■■□□□ 1.43
HDDC3-203ENST00000494993 ZNF638Q14966 1978 aaKnown RBP23.96■■□□□ 1.43
HDDC3-203ENST00000494993 MTMR11A4FU01 709 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 ODC1P11926 461 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 PAX3P23760 479 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 NMT1P30419 496 aaKnown RBP23.95■■□□□ 1.42
HDDC3-203ENST00000494993 ABCD1P33897 745 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 GTF2BQ00403 316 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 C9orf57Q5W0N0 161 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 CENPPQ6IPU0 288 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 BRAPQ7Z569 592 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 LARP4BQ92615 738 aaKnown RBP23.95■■□□□ 1.42
HDDC3-203ENST00000494993 PIAS3Q9Y6X2 628 aa23.95■■□□□ 1.42
HDDC3-203ENST00000494993 A0A1W2PRU2 124 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 HEPACAM2A8MVW5 462 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 ZNF263O14978 683 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 NFICP08651 508 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 ALDH1A3P47895 512 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 MTAPQ13126 283 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 TMEM132DQ14C87 1099 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 SF3A1Q15459 793 aaKnown RBP23.94■■□□□ 1.42
HDDC3-203ENST00000494993 TSSK4Q6SA08 328 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 FAM3CQ92520 227 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 E2F7Q96AV8 911 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 TMEM209Q96SK2 561 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 CHRDQ9H2X0 955 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 UPF2Q9HAU5 1272 aaKnown RBP23.94■■□□□ 1.42
HDDC3-203ENST00000494993 SLC27A5Q9Y2P5 690 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 DERAQ9Y315 318 aa23.94■■□□□ 1.42
HDDC3-203ENST00000494993 DNAH14Q0VDD8 3507 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 ANKRD63C9JTQ0 380 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 PIRO00625 290 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 LILRB5O75023 590 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 ARMCX5Q6P1M9 558 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 TTC9BQ8N6N2 239 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 ATAD1Q8NBU5 361 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 IER2Q9BTL4 223 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 CCSER1Q9C0I3 900 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 ASB3Q9Y575 518 aa23.93■■□□□ 1.42
HDDC3-203ENST00000494993 OBSL1O75147 1896 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 ANO9A1A5B4 782 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 ARNTLO00327 626 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 CYP11A1P05108 521 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 ACOT2P49753 483 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 ZC2HC1CQ53FD0 456 aaPredicted RBP23.92■■□□□ 1.42
HDDC3-203ENST00000494993 PSMG2Q969U7 264 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 RSPRY1Q96DX4 576 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 FAM126AQ9BYI3 521 aaPredicted RBP23.92■■□□□ 1.42
HDDC3-203ENST00000494993 EPC1Q9H2F5 836 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 ST6GALNAC4Q9H4F1 302 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 ASB7Q9H672 318 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 NCDNQ9UBB6 729 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 HSFX1Q9UBD0 423 aa23.92■■□□□ 1.42
HDDC3-203ENST00000494993 TISP43B9A030 160 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 STXBP5Q5T5C0 1151 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 ADALQ6DHV7 355 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 SLFN12LQ6IEE8 588 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 GAREM2Q75VX8 874 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 DNAJB7Q7Z6W7 309 aaPredicted RBP23.91■■□□□ 1.42
HDDC3-203ENST00000494993 YAF2Q8IY57 180 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 OR10T2Q8NGX3 314 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 LMAN1LQ9HAT1 526 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 SMG5Q9UPR3 1016 aaKnown RBP23.91■■□□□ 1.42
HDDC3-203ENST00000494993 C2CD2Q9Y426 696 aa23.91■■□□□ 1.42
HDDC3-203ENST00000494993 STYXL1Q9Y6J8 313 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms