RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 FDFT1P37268 417 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 GALCP54803 685 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 FKBP4Q02790 459 aaKnown RBP eCLIP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 PTP4A2Q12974 167 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 GRB10Q13322 594 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 PRKD1Q15139 912 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 BMT2Q1RMZ1 405 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MAP7D1Q3KQU3 841 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 C1orf141Q5JVX7 400 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SOGA3Q5TF21 947 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 RNF111Q6ZNA4 994 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 CATIPQ7Z7H3 387 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SLC13A5Q86YT5 568 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 CPSF7Q8N684 471 aaKnown RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 TERB1Q8NA31 727 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 LNX1Q8TBB1 728 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MZB1Q8WU39 189 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 TMEM174Q8WUU8 243 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 STON2Q8WXE9 905 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 NACC2Q96BF6 587 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 ANKRD36BP1Q96IX9 119 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 NACAP1Q9BZK3 213 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 DKK3Q9UBP4 350 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 RSL24D1Q9UHA3 163 aaKnown RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MTUS1Q9ULD2 1270 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SPO11Q9Y5K1 396 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SLC4A4Q9Y6R1 1079 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 DDX60LQ5H9U9 1706 aaKnown RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 RGPD3A6NKT7 1758 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 RGPD4Q7Z3J3 1758 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MYMKA6NI61 221 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 TMEM114B3SHH9 223 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 FAM47E-STBD1D6RA91 191 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 EIF3FO00303 357 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 TPPPO94811 219 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 BMP10O95393 424 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 ESRRBO95718 433 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 PCSK6P29122 969 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 EPS15P42566 896 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 RNASE9P60153 205 aaKnown RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 CENPCQ03188 943 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 CALCOCO2Q13137 446 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 DNAJC3Q13217 504 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 KRT81Q14533 505 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 ZNF449Q6P9G9 518 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SV2BQ7L1I2 683 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 NLRX1Q86UT6 975 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 RASSF3Q86WH2 238 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 VPS52Q8N1B4 723 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 CCDC89Q8N998 374 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SLC35G2Q8TBE7 412 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 GRK7Q8WTQ7 553 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 ATP6V0A1Q93050 837 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 DNAJC19Q96DA6 116 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MTMR9Q96QG7 549 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 TRPC7Q9HCX4 862 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MKS1Q9NXB0 559 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 CNTN3Q9P232 1028 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SLC7A8Q9UHI5 535 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 PPM1HQ9ULR3 514 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 COQ6Q9Y2Z9 468 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 PCDHA8Q9Y5H6 950 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 HEY1Q9Y5J3 304 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 TAF1LQ8IZX4 1826 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 IDH3BO43837 385 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 DNAJA2O60884 412 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 PLEKHA8P1O95397 391 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 PON1P27169 355 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 ADSSP30520 456 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 VCPP55072 806 aaKnown RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 FBXO31Q5XUX0 539 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SPOPLQ6IQ16 392 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 CCDC62Q6P9F0 684 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 C3orf67Q6ZVT6 689 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 EXOC8Q8IYI6 725 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 ZCCHC9Q8N567 271 aaKnown RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 ANKRD42Q8N9B4 389 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MIGA1Q8NAN2 632 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 KCNH5Q8NCM2 988 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 ZNF420Q8TAQ5 688 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MGARPQ8TDB4 240 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 SREK1Q8WXA9 508 aaKnown RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 RAD54LQ92698 747 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 DYDC2Q96IM9 177 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 C7orf26Q96N11 449 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 PNMA5Q96PV4 448 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 HAUS8Q9BT25 410 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 CCDC106Q9BWC9 280 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 MKNK2Q9HBH9 465 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 KCNK9Q9NPC2 374 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 TAGLN3Q9UI15 199 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 VPS28Q9UK41 221 aa5.06□□□□□ -1.6
PRKD3-210ENST00000494667 RTCBQ9Y3I0 505 aaKnown RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 V9GY48 417 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-210ENST00000494667 IQCA1LA6NCM1 817 aa5.05□□□□□ -1.6
PRKD3-210ENST00000494667 FGFR1P11362 822 aa5.05□□□□□ -1.6
PRKD3-210ENST00000494667 GNA11P29992 359 aa5.05□□□□□ -1.6
PRKD3-210ENST00000494667 SLCO1A2P46721 670 aa5.05□□□□□ -1.6
PRKD3-210ENST00000494667 TXNL4AP83876 142 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms