RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ETFDHQ16134 617 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 ZNF782Q6ZMW2 699 aaPredicted RBP5.67□□□□□ -1.5
SMC4-223ENST00000493695 TMIEQ8NEW7 156 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 TRIB1Q96RU8 372 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 SMOQ99835 787 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 VSX1Q9NZR4 365 aaPredicted RBP5.67□□□□□ -1.5
SMC4-223ENST00000493695 FLRT1Q9NZU1 646 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 SH3BP4Q9P0V3 963 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 SLC45A2Q9UMX9 530 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 ZNF521Q96K83 1311 aa5.67□□□□□ -1.5
SMC4-223ENST00000493695 A0A0B4J269 797 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 VWC2LB2RUY7 222 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 TUBA4AP68366 448 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 TUBB3Q13509 450 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 HLXQ14774 488 aaPredicted RBP5.66□□□□□ -1.5
SMC4-223ENST00000493695 ACAP2Q15057 778 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 TAPT1Q6NXT6 567 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 SEMA6DQ8NFY4 1073 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 WDR66Q8TBY9 1149 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 COG1Q8WTW3 980 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 RPL36ALQ969Q0 106 aaKnown RBP5.66□□□□□ -1.5
SMC4-223ENST00000493695 JKAMPQ9P055 326 aa5.66□□□□□ -1.5
SMC4-223ENST00000493695 SMIM22K7EJ46 135 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 POLRMTO00411 1230 aaKnown RBP5.65□□□□□ -1.5
SMC4-223ENST00000493695 TP73O15350 636 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 NDUFB7P17568 137 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 AGXTP21549 392 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 EPHB2P29323 1055 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 ZNF280AP59817 542 aaPredicted RBP5.65□□□□□ -1.5
SMC4-223ENST00000493695 TARDBPQ13148 414 aaKnown RBP eCLIP5.65□□□□□ -1.5
SMC4-223ENST00000493695 KLF9Q13886 244 aaPredicted RBP5.65□□□□□ -1.5
SMC4-223ENST00000493695 PLAC9Q5JTB6 97 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 LHFPL2Q6ZUX7 228 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 PBKQ96KB5 322 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 BHMT2Q9H2M3 363 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 USP35Q9P2H5 1018 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 TBC1D30Q9Y2I9 924 aa5.65□□□□□ -1.5
SMC4-223ENST00000493695 TRIAP1O43715 76 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 CYP2D6P10635 497 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 CDC42EP1Q00587 391 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 FLYWCH1Q4VC44 716 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 ZNF365Q70YC5 407 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 YTHDF3Q7Z739 585 aaKnown RBP5.64□□□□□ -1.51
SMC4-223ENST00000493695 FAM9AQ8IZU1 332 aaPredicted RBP5.64□□□□□ -1.51
SMC4-223ENST00000493695 IL17RDQ8NFM7 739 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 DENND1AQ8TEH3 1009 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 HDAC10Q969S8 669 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 FKBP10Q96AY3 582 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 SH2D3AQ9BRG2 576 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 ACTRT3Q9BYD9 372 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 ADGRA2Q96PE1 1338 aa5.64□□□□□ -1.51
SMC4-223ENST00000493695 TARM1B6A8C7 271 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 SLC43A1O75387 559 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 ZFXP17010 805 aaPredicted RBP5.63□□□□□ -1.51
SMC4-223ENST00000493695 DRD4P21917 467 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 CCT4P50991 539 aaKnown RBP5.63□□□□□ -1.51
SMC4-223ENST00000493695 SLC16A1P53985 500 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 PSMC1P62191 440 aaKnown RBP5.63□□□□□ -1.51
SMC4-223ENST00000493695 SLC9A4Q6AI14 798 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 SPATS2Q86XZ4 545 aaKnown RBP5.63□□□□□ -1.51
SMC4-223ENST00000493695 AFAP1L2Q8N4X5 818 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 ATL2Q8NHH9 583 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 LRIG1Q96JA1 1093 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 ALG8Q9BVK2 526 aa5.63□□□□□ -1.51
SMC4-223ENST00000493695 HOXB6P17509 224 aaKnown RBP5.62□□□□□ -1.51
SMC4-223ENST00000493695 NDUFV1P49821 464 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 TFF2Q03403 129 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 TBCCQ15814 346 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 PGM2L1Q6PCE3 622 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 FANCBQ8NB91 859 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 IFI44Q8TCB0 444 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 CLPTM1LQ96KA5 538 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 SLAMF7Q9NQ25 335 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 EHD3Q9NZN3 535 aa5.62□□□□□ -1.51
SMC4-223ENST00000493695 GPR39O43194 453 aa5.61□□□□□ -1.51
SMC4-223ENST00000493695 VPS4BO75351 444 aa5.61□□□□□ -1.51
SMC4-223ENST00000493695 CHRM3P20309 590 aa5.61□□□□□ -1.51
SMC4-223ENST00000493695 SLC29A4Q7RTT9 530 aa5.61□□□□□ -1.51
SMC4-223ENST00000493695 DKK3Q9UBP4 350 aa5.61□□□□□ -1.51
SMC4-223ENST00000493695 E7ENX8 843 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 NDUFS2O75306 463 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 GNAI3P08754 354 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 FAM163BP0C2L3 166 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 ITGALP20701 1170 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 CERS1P27544 350 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 GNAI1P63096 354 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 POU6F2P78424 691 aaPredicted RBP5.6□□□□□ -1.51
SMC4-223ENST00000493695 TAP2Q03519 686 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 KLF1Q13351 362 aaPredicted RBP5.6□□□□□ -1.51
SMC4-223ENST00000493695 IL10RAQ13651 578 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 BMPR2Q13873 1038 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 GPR162Q16538 588 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 SLC44A4Q53GD3 710 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 C11orf87Q6NUJ2 197 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 CEP85Q6P2H3 762 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 NEK8Q86SG6 692 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 CNGA4Q8IV77 575 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 RFKQ969G6 155 aa5.6□□□□□ -1.51
SMC4-223ENST00000493695 QTRT1Q9BXR0 403 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms