RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 METRNLQ641Q3 311 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 CCSAPQ6IQ19 270 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLC4A10Q6U841 1118 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 PDZD4Q76G19 769 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 RSPH3Q86UC2 560 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 PPP1R3BQ86XI6 285 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 CCDC146Q8IYE0 955 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 C9orf106Q8NAJ2 232 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 SIMC1Q8NDZ2 872 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLC9A6Q92581 669 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLC35A4Q96G79 324 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 MRGPRX1Q96LB2 322 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 MRI1Q9BV20 369 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 C1orf43Q9BWL3 253 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 C22orf23Q9BZE7 217 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 C11orf54Q9H0W9 315 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 EPC1Q9H2F5 836 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZMAT3Q9HA38 289 aaKnown RBP3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 KMT5AQ9NQR1 393 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 LMBRD1Q9NUN5 540 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 ABCF2Q9UG63 623 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 TLK1Q9UKI8 766 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 TCRBV7S2A1N4TA0A589 114 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 TBKBP1A7MCY6 615 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 B5MCH6 92 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 RNASET2O00584 256 aaKnown RBP3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 GRM6O15303 877 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 LPXNO60711 386 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 CAND2O75155 1236 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 MATN4O95460 622 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLC5A1P13866 664 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 ATP5JP18859 108 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 SEC24CP53992 1094 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 CNN3Q15417 329 aaKnown RBP3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 THEMIS2Q5TEJ8 643 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 APOA5Q6Q788 366 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 UBE3BQ7Z3V4 1068 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 SRGAP1Q7Z6B7 1085 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 ARHGEF19Q8IW93 802 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 SRRM1Q8IYB3 904 aaKnown RBP3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 RNF169Q8NCN4 708 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 IL17RDQ8NFM7 739 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 CDK5RAP3Q96JB5 506 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 NEU1Q99519 415 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 MRPL46Q9H2W6 279 aaKnown RBP3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 ARMT1Q9H993 441 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 PNPOQ9NVS9 261 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 MOCS1Q9NZB8 636 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM30AQ9NZY2 134 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 STAP2Q9UGK3 403 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLC45A2Q9UMX9 530 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 POLHQ9Y253 713 aa3.69□□□□□ -1.82
HMGB1P30-201ENST00000492455 DNAJC9-AS1A6NH13 148 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 TMEM200CA6NKL6 621 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZNF185O15231 689 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 TEX33O43247 280 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLC43A1O75387 559 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 PRSS23O95084 383 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 AHSGP02765 367 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 RPLP2P05387 115 aaKnown RBP3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 SNRPA1P09661 255 aaKnown RBP3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 NPR1P16066 1061 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLC6A2P23975 617 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 PTH2RP49190 550 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZNF81P51508 661 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 CLRN1P58418 232 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 SEMA5AQ13591 1074 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZNF529Q6P280 563 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 KSR2Q6VAB6 950 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 GADL1Q6ZQY3 521 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 MAEAQ7L5Y9 396 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 GRASPQ7Z6J2 395 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 SH2D3CQ8N5H7 860 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 PJA1Q8NG27 643 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 ANKS1AQ92625 1134 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 DCLRE1CQ96SD1 692 aaKnown RBP3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 CPPED1Q9BRF8 314 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 DUSP26Q9BV47 211 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZNF768Q9H5H4 540 aaKnown RBP3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 KIAA1586Q9HCI6 787 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 MAN1C1Q9NR34 630 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 SYBUQ9NX95 663 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 TRPM5Q9NZQ8 1165 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 VSX1Q9NZR4 365 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 PCDHGB6Q9Y5F9 930 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 PCDHA1Q9Y5I3 950 aa3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 EPN1Q9Y6I3 576 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P30-201ENST00000492455 GAGE12BA1L429 117 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 CCDC78A2IDD5 438 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 GAGE12HA6NDE8 117 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 CAPN8A6NHC0 703 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 H3BUI4 141 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 MYO1FO00160 1098 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 PMM2O15305 246 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 ARIH2O95376 493 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 FTH1P19P0C7X4 201 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 RAP2BP61225 183 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 GUCY1B3Q02153 619 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLFN5Q08AF3 891 aa3.67□□□□□ -1.82
HMGB1P30-201ENST00000492455 FOXF2Q12947 444 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms