RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 A0A0U1RQJ8 604 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 MYO1CO00159 1063 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 LILRB3O75022 631 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 GLP2RO95838 553 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 ADRB2P07550 413 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 CLTAP09496 248 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 WNT7BP56706 349 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 VSNL1P62760 191 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 PAK1Q13153 545 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 ADAM15Q13444 863 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 KRT31Q15323 416 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 DUSP6Q16828 381 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 WDR93Q6P2C0 686 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 SMYD4Q8IYR2 804 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-219ENST00000491747 SCFD1Q8WVM8 642 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 ATRIPQ8WXE1 791 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 PABPC5Q96DU9 382 aaKnown RBP10.12□□□□□ -0.79
BRCA1-219ENST00000491747 CBWD1Q9BRT8 395 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 COLEC11Q9BWP8 271 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 TLE6Q9H808 572 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 UBE2ZQ9H832 354 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-219ENST00000491747 CLDND1Q9NY35 253 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 RWDD2AQ9UIY3 292 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 ADAM28Q9UKQ2 775 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 AGO2Q9UKV8 859 aaKnown RBP10.12□□□□□ -0.79
BRCA1-219ENST00000491747 BRWD1Q9NSI6 2320 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 TGFB1I1O43294 461 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 TBX10O75333 385 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 SOD2P04179 222 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 KCNQ1P51787 676 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 STK4Q13043 487 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 ALCAMQ13740 583 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 KCNC3Q14003 757 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 ZBTB6Q15916 424 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 UPP1Q16831 310 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 SLFN12LQ6IEE8 588 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 PDE12Q6L8Q7 609 aaKnown RBP10.12□□□□□ -0.79
BRCA1-219ENST00000491747 FUT10Q6P4F1 479 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 SRLQ86TD4 932 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 SYCP3Q8IZU3 236 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 KIAA0895Q8NCT3 520 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 POMGNT1Q8WZA1 660 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 SAAL1Q96ER3 474 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 HERC2P3Q9BVR0 1158 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 PCIF1Q9H4Z3 704 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 NGRNQ9NPE2 291 aaKnown RBP10.12□□□□□ -0.79
BRCA1-219ENST00000491747 RMND1Q9NWS8 449 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 TUBGCP4Q9UGJ1 667 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 EXOC7Q9UPT5 735 aa10.12□□□□□ -0.79
BRCA1-219ENST00000491747 CARNS1A5YM72 827 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 GOLGA8IPA6NC78 632 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 GOLGA8JA6NMD2 632 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 H3BQ06 376 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-219ENST00000491747 EIF3DO15371 548 aaKnown RBP eCLIP10.11□□□□□ -0.79
BRCA1-219ENST00000491747 TADA2AO75478 443 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 KCNA5P22460 613 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 CA8P35219 290 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 KRT9P35527 623 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 GUCY2FP51841 1108 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 COPB1P53618 953 aaKnown RBP10.11□□□□□ -0.79
BRCA1-219ENST00000491747 MAP9Q49MG5 647 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 KIAA0319Q5VV43 1072 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 EP400NLQ6ZTU2 488 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 NELFCDQ8IXH7 590 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 EFHBQ8N7U6 833 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 GOLGA6L1Q8N7Z2 621 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 TMEM206Q9H813 350 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 RPF1Q9H9Y2 349 aaKnown RBP10.11□□□□□ -0.79
BRCA1-219ENST00000491747 PLEKHA5Q9HAU0 1116 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 CHST7Q9NS84 486 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 CLEC1BQ9P126 229 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 COG5Q9UP83 839 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 IRAK3Q9Y616 596 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-219ENST00000491747 C2CD2LO14523 706 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 CLASP2O75122 1294 aaKnown RBP10.11□□□□□ -0.79
BRCA1-219ENST00000491747 RPN1P04843 607 aaKnown RBP10.11□□□□□ -0.79
BRCA1-219ENST00000491747 ARHGAP25P42331 645 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 AMPD2Q01433 879 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 TCP11X2Q5H9J9 407 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 JADE1Q6IE81 842 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-219ENST00000491747 FAM212AQ96EL1 285 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 KIF12Q96FN5 646 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 ASB2Q96Q27 587 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 FAM213AQ9BRX8 229 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 VPS16Q9H269 839 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 HAUS4Q9H6D7 363 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 VIPAS39Q9H9C1 493 aa10.11□□□□□ -0.79
BRCA1-219ENST00000491747 KCNJ18B7U540 433 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 I3L4J1 428 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 NDUFA10O95299 355 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 NFICP08651 508 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 GARTP22102 1010 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 TNNT3P45378 269 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 BRCC3P46736 316 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 KCNJ12Q14500 433 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 KYAT1Q16773 422 aa10.1□□□□□ -0.79
BRCA1-219ENST00000491747 TSR1Q2NL82 804 aaKnown RBP10.1□□□□□ -0.79
BRCA1-219ENST00000491747 RTP2Q5QGT7 225 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms