RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 AK8Q96MA6 479 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 BACH2Q9BYV9 841 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 CCSER1Q9C0I3 900 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 PCIF1Q9H4Z3 704 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 TMLHEQ9NVH6 421 aa9.67□□□□□ -0.86
HDAC3-211ENST00000491581 NDRG2Q9UN36 371 aaKnown RBP9.67□□□□□ -0.86
HDAC3-211ENST00000491581 CFAP54Q96N23 3096 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 FAM170BA6NMN3 283 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 PROB1E7EW31 1015 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 PIRO00625 290 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 PPP1R37O75864 691 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 PRPF6O94906 941 aaKnown RBP9.66□□□□□ -0.86
HDAC3-211ENST00000491581 C1RP00736 705 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 SP9P0CG40 484 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 IDEP14735 1019 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 ATF6P18850 670 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 ACAT1P24752 427 aaKnown RBP9.66□□□□□ -0.86
HDAC3-211ENST00000491581 MCM2P49736 904 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 STARD6P59095 220 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 CYP4F8P98187 520 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 FZD5Q13467 585 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 TMEM132DQ14C87 1099 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 WSCD1Q658N2 575 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 OVOS1Q6IE37 1185 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 PDXDC1Q6P996 788 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 PDZD4Q76G19 769 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-211ENST00000491581 ZNF720Q7Z2F6 126 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 ADSSL1Q8N142 457 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 ZSCAN18Q8TBC5 510 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-211ENST00000491581 GIPC2Q8TF65 315 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 BORCS6Q96GS4 357 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 ASB16Q96NS5 453 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 PRRX2Q99811 253 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 PYM1Q9BRP8 204 aaKnown RBP9.66□□□□□ -0.86
HDAC3-211ENST00000491581 CBWD1Q9BRT8 395 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 FAM213AQ9BRX8 229 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 MKNK1Q9BUB5 465 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 STRA6Q9BX79 667 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 C2orf42Q9NWW7 574 aa9.66□□□□□ -0.86
HDAC3-211ENST00000491581 AFF4Q9UHB7 1163 aaKnown RBP9.66□□□□□ -0.86
HDAC3-211ENST00000491581 UBQLN1Q9UMX0 589 aaKnown RBP9.66□□□□□ -0.86
HDAC3-211ENST00000491581 SRPRBQ9Y5M8 271 aaKnown RBP9.66□□□□□ -0.86
HDAC3-211ENST00000491581 KANSL1LA0AUZ9 987 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 ANO9A1A5B4 782 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 H7C4K7 107 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 OAZ2O95190 189 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 GCNT3O95395 438 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 PRAMEF12O95522 483 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 ADRB2P07550 413 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 GDI1P31150 447 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 HOXD13P35453 343 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 SLC39A12Q504Y0 691 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 RRAGBQ5VZM2 374 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 CENPPQ6IPU0 288 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 GAREM2Q75VX8 874 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 MTSS1LQ765P7 747 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 OSTM1Q86WC4 334 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 BEST2Q8NFU1 509 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 RIN3Q8TB24 985 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 POMGNT1Q8WZA1 660 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 NKD2Q969F2 451 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-211ENST00000491581 SEPT5Q99719 369 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-211ENST00000491581 DDX23Q9BUQ8 820 aaKnown RBP9.65□□□□□ -0.86
HDAC3-211ENST00000491581 MRPL44Q9H9J2 332 aaKnown RBP9.65□□□□□ -0.86
HDAC3-211ENST00000491581 PLEKHA5Q9HAU0 1116 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 LTB4R2Q9NPC1 389 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 RBM12Q9NTZ6 932 aaKnown RBP9.65□□□□□ -0.86
HDAC3-211ENST00000491581 POLR3BQ9NW08 1133 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-211ENST00000491581 DPP3Q9NY33 737 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 KCND2Q9NZV8 630 aa9.65□□□□□ -0.86
HDAC3-211ENST00000491581 AGO2Q9UKV8 859 aaKnown RBP9.65□□□□□ -0.86
HDAC3-211ENST00000491581 CACNA1IQ9P0X4 2223 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 ANTXRLA6NF34 631 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 SLC38A8A6NNN8 435 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 HEPACAM2A8MVW5 462 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 CYB561D2O14569 222 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 ECI2O75521 394 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 ITGB3P05106 788 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 POU2F2P09086 479 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 POLR2BP30876 1174 aaKnown RBP9.64□□□□□ -0.87
HDAC3-211ENST00000491581 STAT6P42226 847 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 TFAMQ00059 246 aaKnown RBP9.64□□□□□ -0.87
HDAC3-211ENST00000491581 TNK2Q07912 1038 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 DMWDQ09019 674 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 PLD1Q13393 1074 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 GAS6Q14393 721 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 NAIF1Q69YI7 327 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-211ENST00000491581 PHLDB3Q6NSJ2 640 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 USP37Q86T82 979 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 C1orf210Q8IVY1 113 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 GRAMD1CQ8IYS0 662 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
HDAC3-211ENST00000491581 APPL2Q8NEU8 664 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 CXorf38Q8TB03 319 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 NXPE3Q969Y0 559 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 ZNF512Q96ME7 567 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-211ENST00000491581 PDE11AQ9HCR9 933 aa9.64□□□□□ -0.87
HDAC3-211ENST00000491581 SPATA6Q9NWH7 488 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-211ENST00000491581 DAXXQ9UER7 740 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms